Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01151 ATGGAAGATACATTTGTTCCGTTTCGTGGAATTAAAAATGATCTTCAAGGCAGATTGATGTGTTACAAGCAAGACTGGATTGGTGGTCTTAGAGCAGGCTTCAGGATATTGGCCCCTACCACGTATATATTTTTTGCATCAGCAATTCCTGTTATTTCGTTTGGAGAACAATTGGAAAGAGACACAGATGGAGTACTTACCGCAGTTCAAACTTTAGCATCTACTGCTTTGTGTGGAATTGTACAGTCTATTATAGGAGGCCAACCTTTACTGATTCTTGGAGTAGCTGAACCAACTGTAATTATGTATACATTCATGTTCAACTTTGCGAAAGGAAGGCCAGAATTGGGTTCAAAACTCTTTCTAGCATGGACTGGATGGGTATGCGTGTGGACTGCCATCTTGTTGTTCCTATTGGCTATCTTGGGAGCTTGCTCCATCATCAACAGGTTCACTCGATTAGCAGGGGAACTGTTTGGTCTTCTTATTGCAATGCTTTTTATGCAAGAGGCTATTAAAGGACTCATCCATGAGTTTCACATACCTGAGAGAGCAAACCCATCATCACCTGAGTTTCAATCTTCATGGAGATTTGGAAATGGCATGTTTTCTTTGGTTCTGTCCTTTGGCCTCTTGCATACAGCATTGAAAAGCCGAAAGGCAAGGTCTTGGCGATATGGATCAGGATGTTTACGAGGCTTCATAGCAGATTATGGTGTCCCATTGATGGTTCTAGTATGGACTGCCATTTCTTATATTCCAGCTGGAAGTATTCCAAAAGGAGTTCCTAGGCGTCTTTTCAGTCCAAATCCATGGTCCTCTGGTGCATTTGAAAACTGGACTGACATGCTGAAAGTACCAGTTCTCTATATTATTGGAGCATTTATTCCAGCAACAATGATTGCTGTTCTATATTATTTCGACCATAGTGTGGCATCTCAGCTTGCTCAGCAGAAAGAATTCAATTTAAGAAAGCCACCTTCTTTCCATTATGATTTACTTCTATTGGGCTTCATGGTTATAATATGTGGTCTAATTGGAATTCCTCCGTCCAACGGTGTTATTCCACAATCTCCAATGCATACCAAAAGTTTAGCTACATTGAAGCACCAGTTACTTAGGAACCGGCTTGTTGCTGCAGCACGAAGTTCTATGAGAAAACAAGAAAGTTTGGGACAAGTATATGGGAGTATGCAAGATGCGTACTGGCAGATGCAAACCCCTCTAGCTCACGAAGAATCTTCCTCAAAGGGACTTAAAGAGTTGAAAGAGTCGACAATTCAATTGGCATCATGCATGGGGAGTATAAATGCTCCAGTTGACGAGTCAATATTTGATGTCAAGAAGGAAATTGATGATTTATTGCCTGTTGAGGTCAAAGAGCAACGAATGAGCAACCTGCTCCAGTCAGTGATGGTAGTAGGATGTGTAGCAGCAATGCCTTTCCTGAAAATGATTCCAACTTCTGTGCTATGGGGTTATTTTGCTTTCATGGCCATTGAAAACTTACCTGGCAACCAGTTCTGGGAACGGATTTTATTCATTTTAACTGCTCCAAGCAGAAGATACAAAGTTCTGGAGGAGTGCCATGCAACTTATTTGGAAACCGTTCCATTCAAGACAATTGCAGTGTTTACAGTCTTCCAGACTGCTTACTTGCTTGTTTGTTTTGGTATCACTTGGATTCCAACAGCTGGGGTTCTATTCCCATTGATGATAATGTTTCTGGTTCCCGTTAGGCAATACATTCTGCCCAAGGTTTTCAAAGGAGCACACCTTCAAGATTTAGATGCTGCAGAATATGAAGAAGTACCTGCTTTACCATTCAGCCTAGCTACTGAAGGGGACTTGAACAAGACAGCTTCCTTTGCAGATGATGGAGAAATTGTAGATGGAATAATCACCAGAAGCAGGGGTGAGATAAGACATGTTTGCAGTCCTAAGTTCATGAGCTCCACTCCAATCACATCCCAAGAGTTAGCCAGTGTTCAAAGTCCAAGGTTACCAGATAAGGTATAA 2019 0.416 MEDTFVPFRGIKNDLQGRLMCYKQDWIGGLRAGFRILAPTTYIFFASAIPVISFGEQLERDTDGVLTAVQTLASTALCGIVQSIIGGQPLLILGVAEPTVIMYTFMFNFAKGRPELGSKLFLAWTGWVCVWTAILLFLLAILGACSIINRFTRLAGELFGLLIAMLFMQEAIKGLIHEFHIPERANPSSPEFQSSWRFGNGMFSLVLSFGLLHTALKSRKARSWRYGSGCLRGFIADYGVPLMVLVWTAISYIPAGSIPKGVPRRLFSPNPWSSGAFENWTDMLKVPVLYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPPSFHYDLLLLGFMVIICGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNRLVAAARSSMRKQESLGQVYGSMQDAYWQMQTPLAHEESSSKGLKELKESTIQLASCMGSINAPVDESIFDVKKEIDDLLPVEVKEQRMSNLLQSVMVVGCVAAMPFLKMIPTSVLWGYFAFMAIENLPGNQFWERILFILTAPSRRYKVLEECHATYLETVPFKTIAVFTVFQTAYLLVCFGITWIPTAGVLFPLMIMFLVPVRQYILPKVFKGAHLQDLDAAEYEEVPALPFSLATEGDLNKTASFADDGEIVDGIITRSRGEIRHVCSPKFMSSTPITSQELASVQSPRLPDKV 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01151 672 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
Vian6g01151 672 Pfam HCO3- transporter family 202 370 IPR011531 GO:0006820|GO:0016020
Vian6g01151 672 Pfam HCO3- transporter family 457 547 IPR011531 GO:0006820|GO:0016020
Vian6g01151 672 Gene3D Helical hairpin bin 18 60 - -
Vian6g01151 672 PANTHER ANION EXCHANGE PROTEIN 2 605 IPR003020 GO:0005452|GO:0006820|GO:0016020
Vian6g01151 672 FunFam probable boron transporter 2 18 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01151 Vian-Chr6 29102269 29106660 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01151 1 670 Antiporters AT3G62270 76.923 0.0 1077
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01151 K24194 - gmx:100795777 1214.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01151 6 29102269 29106660 Vian6g01151 6 29102269 29106660 ECH