Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01106 ATGAAGTTCTTCCAATGGCGTTTTGGTGGCCCTTGCTCGTTCTACTACTGGCTTTCGTCATCTGCAAGTTCCTTCTCATTCTTATTCCTCCCAAGGTTCCTTCCATTTGACGTCGACTCCTCCGGTGGTACTCTCCTTTTTCACTCCCTATTGCACGTGCCTCCAAGGGGAACGACACAGCAATCGAACGGGAAAGTTCAGTGCTACGAGCCCGATACCGTGAAATATTTGGGATATGTTCCTACGTTAACGCCCGATGAGATTTCAGAACATGCAGGTTGGTCTGGATGCTTTTACTTCCGAATCATCCAATCAGCCCTTGCTGCTATAGGAGCTCCAGAGGAACTTGTTGAGGTGATAACAGGGTTTGCTGAAACAGGAGAAGCACTGGTATCTTCTGTTGACAAAGTCATTTTTGTTGGATCACCTGGGATAGGCAAGATGATAATGAGCAATGCTGCGGAGAAACTTATACCAGTTACATTGGAGTTTGGTGGAAAAGATGCATTTATTGTTTGTGCTCAAATTGCTGTCAGGGCTGTTCTTCAGTCAAGTGGGCAGAACTGTGCTGGGGCTCAGCGACTTTATGACCACAGGAACATATATGCATCCTTTGCCAGTAAAGTTACCAAAATTATTAAATCTATTACAGCTGGCCCACCACTTGCTAGAAAATATGATATGGGAGCTTTATGTATGCATGCGCATTCTGAAAAGCTTCAAGGCCTTATAAATGATGCTTTAGACAAAAGAGCTGAAATTATTGCACGAAGAAGTTCTGGACACATAGGTGAAGGTGCAGTTGATCAATATTTCCCCCGTACGGTGATTGTGAATGTAAATCACTCACTGAGATTGATGCAGCAAGAGGCCTTTGGACCAATCATGCCAATTATGAAATTTAGCTCCGATGAGGAGGTTGTGAAGCTTGCAAATGATTCAAAATTTGGGCTTGGATGTGCTGTTTTCTCAGGCAGTCAGAGCCGTGCTACAGATATAGCTTTCCAGATAAATTGTGGGATTGCAGCGATTAATGATTTTGGTGCAACATACATGTGTCAGTCGCTGCCATTCGGGGGAGTGAAACGAAGTGGATTTGGTGGTGCAGAAGGTTTGCGGGCATGCTGCCTTGTAAAAGCTGTTGTAGAAGATAGATGTAATCCTGTTGCAGAAAATGGACTTGAGCTCCAGGAATCCCTTGTTGAAGCACTATTCGGGCTCGGCTTATGGGACCGTTTGCAAGCATTGGTTAACGTGCCGAAAATGCTTACTGAGCAGAGCTCTCTACGTGGCAGCATAAAAAAGAAAGATGACTAA 1317 0.4457 MKFFQWRFGGPCSFYYWLSSSASSFSFLFLPRFLPFDVDSSGGTLLFHSLLHVPPRGTTQQSNGKVQCYEPDTVKYLGYVPTLTPDEISEHAGWSGCFYFRIIQSALAAIGAPEELVEVITGFAETGEALVSSVDKVIFVGSPGIGKMIMSNAAEKLIPVTLEFGGKDAFIVCAQIAVRAVLQSSGQNCAGAQRLYDHRNIYASFASKVTKIIKSITAGPPLARKYDMGALCMHAHSEKLQGLINDALDKRAEIIARRSSGHIGEGAVDQYFPRTVIVNVNHSLRLMQQEAFGPIMPIMKFSSDEEVVKLANDSKFGLGCAVFSGSQSRATDIAFQINCGIAAINDFGATYMCQSLPFGGVKRSGFGGAEGLRACCLVKAVVEDRCNPVAENGLELQESLVEALFGLGLWDRLQALVNVPKMLTEQSSLRGSIKKKDD 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01106 438 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 90 379 IPR016162 GO:0016491
Vian6g01106 438 SUPERFAMILY ALDH-like 89 381 IPR016161 GO:0016491
Vian6g01106 438 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 89 381 - -
Vian6g01106 438 Pfam Aldehyde dehydrogenase family 95 374 IPR015590 GO:0016491
Vian6g01106 438 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 166 354 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01106 Vian-Chr6 28528530 28535829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01106 25 95 Aldehyde Dehydrogenase Gene Family AT3G66658 45.455 9.28e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01106 - - var:108342487 583.563