Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01101 ATGGAGAGCCAACAGGAAATGATAGTAGGAAAGGTATGTGAAATCTATGAGGAAATCTCCAAACTTGGAGACCTCAACCCCTCCAGCCATGTCAACAACCTCTTCACCCAACTTGTCACGATTTGCACCACCCCATGTCAAATAGATGTTTCTCAGCTGAGCCAACAGGTTAGAGAAACCGTAGCAAAGCTCATTAGACTTTGTGGGAAAGCTGAGGGACTTCTTGAGAGTCACTACTCAACCATCATAGGATCATATGAAAATCCTTTAAACCACATGAAACTCTTCCCCTACTACTCTAATTACCTCAAACTAAGTCACTTGGAGTTCACCATGCTCACCACACACTGCACCCAACAAGTCCCCTCCCAACTTGCCTTTGTGGGTTCAGGTCCCCTTCCTCTCACCTCAATCATTTTGGCCACCCATTACCTCAGGCAGACATGCTTCCACAACTACGACATAGATCTTTTGGCAAATGTCAAGGCTCATAGCTTGGTCTCTTCGGACCCTGACTTGTCCAAGAGAATGTTCTTCCACACTAATGATATTCTAAACGTGTCAAATGGCCTCAAGGACTATAACGTGGTCTACTTGGCAGCACTTGTGGGCATGGACCATAAGGATAAAGCAGAAGTCATCAAACACCTTGCCAAGTTCATGGCTCCAGGAGCTATTTTGCTGTTGAGGAGTGCACATGGTGCTAGAGCCTTCCTCTACCCGGTGGTTGATCCTTCTTCCGATCTCAAAGGTTTTGAAATTCTCTCCGTTTTTCACCCCACTGATGAGGTTATTAACTCAGTTATTGTTGCACGCAAGCATTTGGTGAATCAAGGGACTTATTCAGCAGTGTTGGCTAGCAAATGCTATGGAGTTGAAGGGTTTAATCCCTTCAACCATGGGAAGGTTATTGAGGAGTTGACAGTTGAAGATCAAGCTTGA 942 0.4522 MESQQEMIVGKVCEIYEEISKLGDLNPSSHVNNLFTQLVTICTTPCQIDVSQLSQQVRETVAKLIRLCGKAEGLLESHYSTIIGSYENPLNHMKLFPYYSNYLKLSHLEFTMLTTHCTQQVPSQLAFVGSGPLPLTSIILATHYLRQTCFHNYDIDLLANVKAHSLVSSDPDLSKRMFFHTNDILNVSNGLKDYNVVYLAALVGMDHKDKAEVIKHLAKFMAPGAILLLRSAHGARAFLYPVVDPSSDLKGFEILSVFHPTDEVINSVIVARKHLVNQGTYSAVLASKCYGVEGFNPFNHGKVIEELTVEDQA 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01101 313 PANTHER NICOTIANAMINE SYNTHASE 3 3 289 IPR004298 GO:0030410|GO:0030418
Vian6g01101 313 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 278 IPR004298 GO:0030410|GO:0030418
Vian6g01101 313 Pfam Nicotianamine synthase protein 2 276 IPR004298 GO:0030410|GO:0030418
Vian6g01101 313 Gene3D Vaccinia Virus protein VP39 6 274 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01101 Vian-Chr6 28470076 28471017 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01101 4 273 Nicotianamine Synthase Gene Family AT1G56430 57.721 2.16e-115 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01101 K05953 - gmx:100814069 532.332