Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01088 ATGGCTTCAAATCCCAAAACCTTGACTTTTGAGGAGGTGTCTAAGCACAACCACAAAAAGGATTGCTGGATCATTGTCAATAGAAAGGTGTATGATATCACCCCATTTTTGGATGACCATCCAGGAGGTGATGAAGTTTTGGTGACGTCAACAGCGAAGGACGCCACCATTGATTTTGAAGATGTGGGCCACAGTGATTCTGCCATAGAAATAATGGAAAAATACTATATTGGGAACTTTGACACTTCCACTCTTCCTGCCAACGTTAACCATAGACAGCCACCACCTACACAAGCTCACGGCGGTGGCAATCAATCTTCTGAATTTGTTGTAAAGATCTTGCAATTCCTGTTGCCTTTGGTGATATTGGGCCTTGCCTTTGCTCTGCGGTCGTATGGCAAAGAGAAGCAGGCAGCACCACATGAAAGCTGA 432 0.4468 MASNPKTLTFEEVSKHNHKKDCWIIVNRKVYDITPFLDDHPGGDEVLVTSTAKDATIDFEDVGHSDSAIEIMEKYYIGNFDTSTLPANVNHRQPPPTQAHGGGNQSSEFVVKILQFLLPLVILGLAFALRSYGKEKQAAPHES 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01088 143 FunFam Cytochrome b5 type B 2 85 - -
Vian6g01088 143 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Vian6g01088 143 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Vian6g01088 143 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Vian6g01088 143 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Vian6g01088 143 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 79 IPR001199 -
Vian6g01088 143 PANTHER CYTOCHROME B5 4 134 - -
Vian6g01088 143 SMART Cyt_b5_2 8 81 IPR001199 -
Vian6g01088 143 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Vian6g01088 143 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 90 IPR036400 -
Vian6g01088 143 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Vian6g01088 143 Gene3D - 2 84 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01088 Vian-Chr6 28273518 28275082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01088 1 135 NADPH P450 reductases AT5G53560 57.778 7.12e-57 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01088 K23490 - gmx:100788796 233.417