Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01049 ATGGAACAGAGCCCCAAAAGAAAACACTCTAGCCTCATCCATGAACTTATCCAAGGAAAGGAGCTAGCAAAGCAGCTCGGTAACCTTCTGGTTTCTTCTTCTCCATCGTCCCATGAAGCTAATGAATTGTTGGTTGATAAAATTCTCTCCTCCTATGAGAAAGCACTCACCATGCTGAACTGGGGGTCCATTGTAGGAGAGGCCAAAACCACCAGTGCCACCATGATGGATTCCCATTGTTCTTTTACGAATGGAGGGAGTCCCAAAAGTGAGGTTGTGGACCGTGAATTAGATCACAAAGCTGTCCTCAAGAAAAGAAAGACCATGCCTAGATGGACGGAGCAAGTGAAGATTTGCTCAAGAACAGGACTCGAGGGGTCTTTGGATGATGGATATAGCTGGAGGAAATACGGGCAGAAGGATATTCTTGGAGCCAAGTTTCCAAGAGGATATTACAGATGCACACATAGAAATGTTCAAGGGTGTCTGGCAACTAAACAAGTTCAAAGGTCAGATGAAGATCCGACAACAATTGAGGTGACCTACAGAGGAAGACATACGTGCACGCAAGCTAAGTATTTGAACAAGGCATTCCCATCAAACATAAAGATGGGTTTGGGGGAAAATCAGTTCCACAATGATGAAACCAATCAACCAATTAAAGAGAAAATACAAGAAACCCCAGTGGGGATTTTCGCCTTTGAAACAGAGCATAGAGTCAAAACCGAGGAATTGGAAATCAAGGAAGATACCTTTCCATGGTTTTCATTTCCTTCTCAATCAAATGGATCAGAAAACGAGGACATTTTACCCGAGTCTACTTTTGAAAACCATTTCACCGAAAGCTTTTCTCCTGCATTCATATCACCTGCCACTTCAGAATCAAACCCTTTCTGTTTGTCAGCGTGCTACTTGAACAGCACTGAACTGTTATGTCAACAGATTCAAACCTCAGAGTCTGATATCACTGAGACATTTTCGGCCCCAACTTCAGTAACCAACTCCCCAATCCTGGATTTGGACATTTTTCTTCATAAAGGGGATTTTGACACGGATTTCCCTTTCAACAACCCTGACTTTTTCTCTTCATTCGAACTTCCCTGCACTTCCACTTAG 1116 0.431 MEQSPKRKHSSLIHELIQGKELAKQLGNLLVSSSPSSHEANELLVDKILSSYEKALTMLNWGSIVGEAKTTSATMMDSHCSFTNGGSPKSEVVDRELDHKAVLKKRKTMPRWTEQVKICSRTGLEGSLDDGYSWRKYGQKDILGAKFPRGYYRCTHRNVQGCLATKQVQRSDEDPTTIEVTYRGRHTCTQAKYLNKAFPSNIKMGLGENQFHNDETNQPIKEKIQETPVGIFAFETEHRVKTEELEIKEDTFPWFSFPSQSNGSENEDILPESTFENHFTESFSPAFISPATSESNPFCLSACYLNSTELLCQQIQTSESDITETFSAPTSVTNSPILDLDIFLHKGDFDTDFPFNNPDFFSSFELPCTST 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01049 371 Pfam WRKY DNA -binding domain 129 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian6g01049 371 FunFam WRKY transcription factor 53 114 191 - -
Vian6g01049 371 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 10 318 IPR044810 GO:0003700
Vian6g01049 371 SMART WRKY_cls 128 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian6g01049 371 Gene3D WRKY domain 115 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian6g01049 371 ProSiteProfiles WRKY domain profile. 123 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian6g01049 371 SUPERFAMILY WRKY DNA-binding domain 127 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01049 Vian-Chr6 27807803 27809567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01049 16 199 WRKY Transcription Factor Family AT5G24110 49.189 2.13e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vian6g01049 WRKY 5.6e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01049 - - gmx:100790050 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g01049 6 27807803 27809567 Vian9g00557 9 6377674 6379678 PCT