Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g01019 ATGAAGAAGGTGAATGCATTTTGTTTATCACACGTTGTTGTTCATCTCTCAATGCTGTGTTTGCTATGCGAATGTAATTCAAAGGCAGTTACGTATATAGTTCACATGGACAAGTCTTACATGCCCAAAGTTTTCACCTCCCAACGCCATTGGTATTCATCCACCGTTACTTCTCTGGATTCTGCCACTCAAAACGTTAACCGTAGCATTTTGTACTCTTATGAAAACGCACTTCACGGTTTCAGTGTTGCCTTATCACCAAAGCAGTTAGAGAGTCTCAAAGAAACACCAGGTTTCATCTCAGCATACAGAGACAGAGCAGCCATTCTTGACACCACCGCTTCCTACGCCTTCCTCTCTCTCAACGTCTCTCACGGCCTCTGGCCAGCTTCCAACTACGGCCAAAACGTCGTCGTTGGCGTCGTCGATTCCGGAATCTGGCCCGAGAGCGACAGCTTCAAAGACGATGGCATGGCAACTCAAACTCCTCCAAAATGGAAGGGAAAGTGCGAGGGTGGTCAACGCTTTGACCCCTCCCTCTGTAACTCCAAACTCGTAGGCGCAAGGTACTTCAACAAAGGCCTTCTCGCAGCGCAGGACGGTGATGACGACACTAAAATTGGCTCCAACTCCGTTAGAGATAGCGTTGGACACGGGACCCACACCGCGTCCACGGTGGCGGGAAACTACGTGAGGGGCGCGTCGTATTTCGGTTACGCCAAGGGCACCGCAAGAGGAATTGCGCCACGTGCTAAAATTGCGATATACAAGGTTGCGTGGGCCCAAGGCGTGTTTGCCTCGGACATGCTCGCCGGTTTGGACCAGGCAATCGCTGACGGAGTGGACGTTATTTCCATTTCAATGGGTTTGGACATGGTGCCCTTGTACGAGGATCCCGTCGCAATCGCCGCTTTCTCTGCTTTGGAGAAAGGCGTGGTGGTTTCAGCTTCTGCAGGAAACGCAGGTCCGTCAGTGGGGTCCATACATAACGGGATTCCGTGGGTTTTAACGGTTGGAGCGAGCAACACAGAGCGCTCTTTTGGCGGCACGTTAATTCTGGGAAACGGGAAGAGATATTCCGGGTGGACTCTGTTCCCAGCAAGTGCCACGCCTGACGTTATGGCTCCGGGGTCGTCGATTTTGGCGGCTTGGGTTCCGGATTTGCCTGCGGCCCAAATTGGCCCAAACGTGGTGTTAAATAATGAATACAATTTGATGTCTGGGACGTCGATGGCTTGTCCTCATGCTTCCGGGGTGGTGGCTCTGTTGCGGAATGCACACCCCGAGTGGAGTGCTTCGGCTGTTAGGTCCGCGTTGATAACTACGGCCAGCCCACTGGATAACTCTGGAAAGCCCATCGAAGAAAATGGAGAGCTCTCTCCACGGGCTTCTCCTCTCGCAATGGGCGCTGGCCTGATTGACCCCAACCGTGCCCTTGACCCAGGTTTGGTTTATGACGCCACCCCTCAAGACTATGTTAACCTCCTCTGTGCCATGAATTTCACTCAGGCTCAAATCTTGACCATTACCAGATCAAAGGCCTACAATTGCTCCAGCCCATCTTACGACGTCAATTATCCCTCTTTCGTGGCATTTTCTGTTGACCTGAGTGTGACAGTGAAGAGAAAATTCCGGAGAATTGTGACGTACGTTGGAGATGGTCCGGCTGCTTACACGGCACGTGTGAGCTCGTCTAATGGCACGCAAATCTCAGTTTCTCCCAATAGGTTGGTCTTCAAGGCAAAATATGAGAAACGGAAATTCAGTTTGACGTTGAAGTCTGAAATGAAGAAGGAAAATGCAATGGCTTTTGGTTCATTAGAATGGGTCGAAGAAACAGGAAGGCACGTTGTTCGGAGTCCCCTTGTGGTTGTACCCACCAACTTTGTCTTTAACCCCTAA 1902 0.51 MKKVNAFCLSHVVVHLSMLCLLCECNSKAVTYIVHMDKSYMPKVFTSQRHWYSSTVTSLDSATQNVNRSILYSYENALHGFSVALSPKQLESLKETPGFISAYRDRAAILDTTASYAFLSLNVSHGLWPASNYGQNVVVGVVDSGIWPESDSFKDDGMATQTPPKWKGKCEGGQRFDPSLCNSKLVGARYFNKGLLAAQDGDDDTKIGSNSVRDSVGHGTHTASTVAGNYVRGASYFGYAKGTARGIAPRAKIAIYKVAWAQGVFASDMLAGLDQAIADGVDVISISMGLDMVPLYEDPVAIAAFSALEKGVVVSASAGNAGPSVGSIHNGIPWVLTVGASNTERSFGGTLILGNGKRYSGWTLFPASATPDVMAPGSSILAAWVPDLPAAQIGPNVVLNNEYNLMSGTSMACPHASGVVALLRNAHPEWSASAVRSALITTASPLDNSGKPIEENGELSPRASPLAMGAGLIDPNRALDPGLVYDATPQDYVNLLCAMNFTQAQILTITRSKAYNCSSPSYDVNYPSFVAFSVDLSVTVKRKFRRIVTYVGDGPAAYTARVSSSNGTQISVSPNRLVFKAKYEKRKFSLTLKSEMKKENAMAFGSLEWVEETGRHVVRSPLVVVPTNFVFNP 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g01019 633 Pfam Subtilase family 134 447 IPR000209 GO:0006508|GO:0008236
Vian6g01019 633 Gene3D - 496 626 - -
Vian6g01019 633 SUPERFAMILY Subtilisin-like 120 483 IPR036852 GO:0004252|GO:0006508
Vian6g01019 633 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 110 IPR037045 -
Vian6g01019 633 Gene3D - 344 365 - -
Vian6g01019 633 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 357 IPR045051 -
Vian6g01019 633 ProSitePatterns Serine proteases, subtilase family, serine active site. 408 418 IPR023828 -
Vian6g01019 633 Pfam Fibronectin type-III domain 523 624 IPR041469 -
Vian6g01019 633 FunFam Subtilisin-like protease SBT1.9 22 111 - -
Vian6g01019 633 ProSiteProfiles Serine proteases, subtilase domain profile. 115 479 - -
Vian6g01019 633 FunFam Subtilisin-like protease SBT1.5 136 492 - -
Vian6g01019 633 Pfam Peptidase inhibitor I9 31 106 IPR010259 -
Vian6g01019 633 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Vian6g01019 633 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Vian6g01019 633 PRINTS Subtilisin serine protease family (S8) signature 407 423 IPR015500 -
Vian6g01019 633 CDD Peptidases_S8_3 110 444 IPR034197 -
Vian6g01019 633 Gene3D Peptidase S8/S53 domain 136 343 IPR036852 GO:0004252|GO:0006508
Vian6g01019 633 Gene3D Peptidase S8/S53 domain 367 492 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g01019 Vian-Chr6 27491860 27494148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g01019 362 612 Subtilisin-like Serine Gene Family AT5G67090 38.976 1.12e-47 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g01019 - - ccaj:109796640 587.8