Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vian6g00977 | ATGGATTGGGCGTTCGTGCATAAAACATGGGATAAGTGGGCTTCTACCAACGTTGGGTATTCTGGTCATCCGTTAAAAGCTGCTTTGCTAATCAACCATGACCCCACTGGACCATCTCGATTGTTATCTACCATTGCTGCACAAGAAGGAATAAAAGCTAATCCCATTGAATTGAGTAACTTTATGGACTTCATCAAACAAAATAAGCTCCATACAGAGCTCTTCGTTATTGGATCCAATCAGTACTTGGTCACAACAATTCATGAGAACTGGTTTAGTGCAAGGTGTATAAACACGTCAAAGCCCGCTGGTGAAGGTGTTATTGTTATACAAACAGCAGCATACATCTTGGTTGCTCTGTATGAAGGTTCCATCGGTCCAGCATCTCGTGCTATGGCAGCTGCTGATCAGTTAACTTGGCAATTAGGACGAAAAAATCTTTAA | 444 | 0.4189 | MDWAFVHKTWDKWASTNVGYSGHPLKAALLINHDPTGPSRLLSTIAAQEGIKANPIELSNFMDFIKQNKLHTELFVIGSNQYLVTTIHENWFSARCINTSKPAGEGVIVIQTAAYILVALYEGSIGPASRAMAAADQLTWQLGRKNL | 147 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vian6g00977 | 147 | SUPERFAMILY | Profilin (actin-binding protein) | 10 | 142 | IPR036140 | - | |
| Vian6g00977 | 147 | PANTHER | OS05G0241400 PROTEIN | 1 | 147 | - | - | |
| Vian6g00977 | 147 | Gene3D | Dynein light chain 2a, cytoplasmic | 9 | 146 | - | - | |
| Vian6g00977 | 147 | Pfam | Profilin | 9 | 142 | IPR005455 | GO:0003779 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vian6g00977 | 1 | 147 | Carbohydrate Esterase | AT4G19410 | 68.919 | 2.03e-70 | 218 |