Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00974 ATGGCGCGTCCTTTCCAAGAACCATTCGATCCTCATTCCACTTCTCACTTCGACTTCCACCTGCACCACCTTCACCTCACGCACCCTTCCATCTCCGCCTTCCTTCTCCTCACGCCTCAACCACGCCATCGCCATTCCCTTCTATACTTCTCTTTATGCTTCCTAAGCTCTCCAACACTCTCCGCTTTGCACCTCAATAATGCTCGTTATGCTGATGCTGGGAATCCAGTGAATATTACTGTGGGTTCTCATGTCTGGGTTGAAGATCCAGATGTATCTTGGATTGATGGACAGGTATCAAATATCAAGGGAAAGGATGCTGAAATTCATACAACCAATGGAAAGAAGGTGGTGACAAAGTTATCAAAAATATATCCCAAAGATATGGAAGCTCCTGCAGGTGGAGTGGATGATATGACTAAGCTTTCATATTTGCATGAGCCCGGAGTCCTGCAGAACTTAAAAACTAGATATGAATTGAATGAAATATATACTTATACTGGTAATATACTGATTGCAATAAATCCATTCCAAAGGCTACCTCATATTTATGATTCCCACATGATGCAACAATACAAGGGAGCACCATTTGGAGAGTTAAGTCCTCATGTATTTGCCATTGCTGATGTTGCATATAGGGCAATGATTCACGAAGGAAAAAGCAATTCAATTTTGGTCAGTGGGGAAAGTGGAGCTGGTAAAACTGAAACTACAAAAATGCTTATGAGATATCTTGCCTTCTTAGGTGGTAGGGCTGCCACTGAAGGTCGAACTGTTGAGCAACAAGTTCTTGAATCAAATCCAGTTCTGGAAGCATTTGGCAATGCTAAAACTGTCAGGAATAACAATTCCAGTCGTTTTGGTAAATTTGTTGAGATCCAATTTGACAAGAGTGGTAGAATCTCGGGAGCAGCCATTCGAACATACCTTCTGGAGAGATCTCGGGTCTGCCAGATTAATGATCCTGAACGCAACTACCACTGCTTTTATTTTCTTTGTGCTGCACCCCAGGAGGAAATTGATAAATACAAATTAGGAAGTCCTACAACATTTCATTACCTTAACCAGTCAAAATGCTATGACCTGGCTGATATAAGTGATTCTCGTGAGTATCTTGCTACCAGGAGAGCTATGGATATTGTTGGAATAAGCCAAAAAGAACAGGAAGCAATTTTCAGAGTTGTTGCTGCGATTCTTCATATAGGGAATATTGATTTTACAAAAGGCAAGGAAGTTGATTCATCAGTTCCAAAAGATGATAAAGCCAATTTCCACTTAAAAACTACTGCTGAGCTTCTTATGTGCGATGCTGGTTCCTTGGAAGATGCATTATGCAAGCGTGTCATGATCACCCCTGAGGAAGTTATAAAACGAAGCCTTGATCCAGAAAGTGCAGCAGTCAGCAGAGATGGCTTGGCAAAAACAATTTATTCTAGGCTCTTTGACTGGTTGGTGAACAAGATTAATAATTCAATTGGACAGGACTCCAGTTCTAAATCTTTGATTGGGGTGCTTGATATCTATGGTTTTGAAAGCTTTAAATCTAACAGTTTTGAGCAGTTCTGCATTAATTTCACAAATGAGAAGCTGCAGCAACATTTCAATCAGGCAACATCTCAGACCATGATAAGCACTTATCACGTGTTTAAGATGGAGCAAGAAGAATACACGAAGGAGCGGATCAATTGGAGCTACATTGAATTTGTTGACAACCAAGATGTCTTGGACCTTATTGAAAAGAAACCTGGAGGAATAATTGCACTCCTTGATGAGGCTTGTATGTTTCCAAAGTCCACACATGAAACATTTTCAAACAAACTTTATCAGACATTTAAGAATCACAAACGCTTTGTTAAGCCAAAACTGTCTCGAACAAATTTCATTATTTCTCATTATGCTGGCGAGGTGCACTACCAGTCTGATCAGTTTTTAGACAAAAACAAAGATTACGTGGTTGCTGAGCATCAAGATTTATTGAGTGCTTCCAATTGTCCATTTGTAGCAGGCCTTTTTCCTCCACTTCCAGAGGAGACATCCAAATCCTCTAAATTTTCTTCAATTGGTTCTCGATTTAAGCTGCAACTACAGCAATTAATGGAAATACTAAGCTCTACACAGCCTCATTACGTTAGATGTGTGAAACCAAACAACCTCCTCAAGCCTGCAATTTTTGAGAATTCCAATGTCATGCAGCAACTTCGCTGTGGTGTGAGTATGGGTGTTTTAGAGGCAATCAGAATCAGTTGTGCTGGCTACCCTACGCGCCGAGCTTTCTTTGAATTTATAAACCGATTTTCCCTTCTTGCTCCAGAGATCACAGAAATACATCATGATGAGAAGACTGTTTGCCTGAAGATTCTGGAAAAAGCAGGGCTTAAAGGATATCAGATTGGACAAACAAAGGTTTTCCTAAGAGCTGGTCAGATGGCTGAACTAGATGCACGGAGAGCTCAAATGCTTGGTAATGCAGCAAAAACTATTCAACGGCGTATACGAACCCATCAAGCTCGTAAACATTATCTTGCACTACGCAAGAACACTACAATTATGCAGGCTCTTTGGAGAGGAAGACTTGCATTCAAATTTTATAACAAATTGAGAAGGGATGCAGCTGCAGTGAAAATTCAGAAGAATATACGTAGATATGGAGCTATGAAATCCTATACTAAACTCAAAGCATCAGTGCTTACTGTGCAAACGGCTTTAAGGGCAATTGCTTCCCTCAAGGAGTTCAGATTTAGGAAACAGGCTAAGGCTTCCATCATTATTCAGGCTCAGTGGCAGTGCCACAAAGCTGCTTCATATTATAAGAAGCTCAAGAAAGGTTCAATTGTCACCCAATGCCGATGGAGGGGTCTCATGGCCAGGAGAGAACTTAGGAAACTGAAAATGAGCAACCTAGAAGAATCCAAAGCACAAGAGATAGCAAAAGTGCAGAATTTACTGCAGGAGATGCAGAACAAATTTGATGAAACCAATGCATTACTTATAAAGGAGCGTGAGGCTGCAAAGAAAGCTATTGATGAAGCACCCCCTGTTGTTAAAGAAACGCAGGTGATTGTTGAAGACACTCAGAAGATTGAATCACTAACAGTGGAAATTGAGAGTCTAAAGTGCACTTCAGAGTTCAGTGTATTCATTCATATGCGAATGAAAGTAGTTTTACTAGATCTTCAGTATAAAGGGGAGAAACAATATTTATTCCCATTTGTTGCTATGAGAAACAAAAGGCCTAACTTGGCTTTGATACTGATAGGCAATTCTGTTATCAGGAAAATCAGTGTGCGTGTGCCTGTGAGCTCCCTTGAGTCAGAGAAACAGAAAGCTGATGACTTTGAAATGAAATATGAAGAGTCCCAAGCTTATTGTGAAGAAAAGAGTAAATTATTAGAAGACACAGAGAAGAAGGTTCGTCAGCTACAAGAATCCATGACCAGGCTAGAAGAGAAAGTTGCTAATTCAGAATCAGAGAATCAAGTTCTACGTCAACAAGCTGTGTCAATGGCACCCAATAAGTTCCTCTCAGGACGTTCTAGATCCGTTATACAGCGACCAGATGGTGGACATGTTGGAACAGAAGCAAAGTCAACTTTGACGCAAGATAATAATGATGTCTTGGCTTATTGGTTATCCAATGCCTCTACACTGGTCTTGTTACTACAGCGCACACTAAAGGCAAGTGGTGCAGCTGGAATGGCTCCTCAACGTCGTCGATCTTCATCAGGGAGTCTGTTCGGGAGGGTGACACATAGTTTCCGTGGAACTCCAGCAGGAGTCACCCTTCCCCTAATCAATGGTAGCATGAGCAGTGTAGATACGTTAAAAGTTGAAGCCAAGTACCCTGCTCTCCTTTTCAAACAGCAGCTTACAGCTTATGTGGAAAAGATATATGGAATGATTCGAGATAACTTGAAGAAAGAAATTTCTCCCTTGCTTGGATTATGCATCCAGGCACCCAGAACATCCAGAGCGAGCTTGGTGAAAGGATCATCACGTTCAGTTGCAAACACTGAAGCCCAGAAAGCTTTGATTGCTCACTGGCAGGGGATAGTTAAGAGCCTTGGGAAATTCTTGAGTACTTTGAAAGCAAATCATGTTCCCCCATATTTGGTTCGTAAGGTGTTCACTCAAATTTTTTCTTTCATCAACGTCCAACTTTTTAACAGTCTTCTTCTAAGACGGGAGTGCTGCTCATTTAGTAACGGAGAATATGTGAAATCTGGTTTGGGTGAATTGGAGGATTGGTGCTCTGGCGCTACAGATGAGTACTGTGGTTCGGCATGGGATGAACTCAGACATATAAGACAGGCTATTGGATTTTTGGTCATACATCAGAAACCAAGGAAAACGCTGCATGAAATAAGTCATGACCTCTGCCCAGTCCTCAGCATACAGCAGCTGTATCGGATTAGCACCATGTACTGGGATGACAAATATGGCACACATAGCGTATCCCCTGATGTTATATCCAATATGAGAGAGTTGATGACTGAAGATTCTAATAACGCAGTCAGTAATTCTTTCCTGTTGGATGATGATTCAAGCATTCCGTTTTCTGTTGATGATTTGGCGAAGTCGAAGGAACTGATCGAGATGTCTGATTTAGAGCCCCCACAACTATTACGTGAAAACACTGGCTTTAGTTTTCTGTTGCCACGCCCAGACGGACAGATTTCGTAG 4680 0.4135 MARPFQEPFDPHSTSHFDFHLHHLHLTHPSISAFLLLTPQPRHRHSLLYFSLCFLSSPTLSALHLNNARYADAGNPVNITVGSHVWVEDPDVSWIDGQVSNIKGKDAEIHTTNGKKVVTKLSKIYPKDMEAPAGGVDDMTKLSYLHEPGVLQNLKTRYELNEIYTYTGNILIAINPFQRLPHIYDSHMMQQYKGAPFGELSPHVFAIADVAYRAMIHEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYFLCAAPQEEIDKYKLGSPTTFHYLNQSKCYDLADISDSREYLATRRAMDIVGISQKEQEAIFRVVAAILHIGNIDFTKGKEVDSSVPKDDKANFHLKTTAELLMCDAGSLEDALCKRVMITPEEVIKRSLDPESAAVSRDGLAKTIYSRLFDWLVNKINNSIGQDSSSKSLIGVLDIYGFESFKSNSFEQFCINFTNEKLQQHFNQATSQTMISTYHVFKMEQEEYTKERINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSNKLYQTFKNHKRFVKPKLSRTNFIISHYAGEVHYQSDQFLDKNKDYVVAEHQDLLSASNCPFVAGLFPPLPEETSKSSKFSSIGSRFKLQLQQLMEILSSTQPHYVRCVKPNNLLKPAIFENSNVMQQLRCGVSMGVLEAIRISCAGYPTRRAFFEFINRFSLLAPEITEIHHDEKTVCLKILEKAGLKGYQIGQTKVFLRAGQMAELDARRAQMLGNAAKTIQRRIRTHQARKHYLALRKNTTIMQALWRGRLAFKFYNKLRRDAAAVKIQKNIRRYGAMKSYTKLKASVLTVQTALRAIASLKEFRFRKQAKASIIIQAQWQCHKAASYYKKLKKGSIVTQCRWRGLMARRELRKLKMSNLEESKAQEIAKVQNLLQEMQNKFDETNALLIKEREAAKKAIDEAPPVVKETQVIVEDTQKIESLTVEIESLKCTSEFSVFIHMRMKVVLLDLQYKGEKQYLFPFVAMRNKRPNLALILIGNSVIRKISVRVPVSSLESEKQKADDFEMKYEESQAYCEEKSKLLEDTEKKVRQLQESMTRLEEKVANSESENQVLRQQAVSMAPNKFLSGRSRSVIQRPDGGHVGTEAKSTLTQDNNDVLAYWLSNASTLVLLLQRTLKASGAAGMAPQRRRSSSGSLFGRVTHSFRGTPAGVTLPLINGSMSSVDTLKVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQKALIAHWQGIVKSLGKFLSTLKANHVPPYLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKSGLGELEDWCSGATDEYCGSAWDELRHIRQAIGFLVIHQKPRKTLHEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRELMTEDSNNAVSNSFLLDDDSSIPFSVDDLAKSKELIEMSDLEPPQLLRENTGFSFLLPRPDGQIS 1559
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00974 1559 SMART MYSc_2a 129 818 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian6g00974 1559 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 869 IPR027417 -
Vian6g00974 1559 Pfam IQ calmodulin-binding motif 943 960 IPR000048 GO:0005515
Vian6g00974 1559 Pfam IQ calmodulin-binding motif 822 840 IPR000048 GO:0005515
Vian6g00974 1559 Pfam IQ calmodulin-binding motif 870 888 IPR000048 GO:0005515
Vian6g00974 1559 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 870 965 IPR027417 -
Vian6g00974 1559 Gene3D - 918 967 - -
Vian6g00974 1559 Gene3D - 819 869 - -
Vian6g00974 1559 Gene3D - 870 917 - -
Vian6g00974 1559 Coils Coil 964 1002 - -
Vian6g00974 1559 Pfam DIL domain 1374 1477 IPR002710 -
Vian6g00974 1559 Gene3D Myosin VI head, motor domain, U50 subdomain 384 683 - -
Vian6g00974 1559 CDD MYSc_Myo11 148 805 IPR036018 -
Vian6g00974 1559 FunFam Myosin 2 384 501 - -
Vian6g00974 1559 Coils Coil 1123 1164 - -
Vian6g00974 1559 Gene3D Kinesin motor domain 137 747 IPR036961 -
Vian6g00974 1559 Pfam Myosin head (motor domain) 136 805 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian6g00974 1559 PRINTS Myosin heavy chain signature 164 183 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian6g00974 1559 PRINTS Myosin heavy chain signature 221 246 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian6g00974 1559 PRINTS Myosin heavy chain signature 268 295 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian6g00974 1559 PRINTS Myosin heavy chain signature 501 529 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian6g00974 1559 PRINTS Myosin heavy chain signature 564 592 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian6g00974 1559 FunFam Myosin heavy chain 324 379 - -
Vian6g00974 1559 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 80 129 IPR004009 GO:0003774|GO:0005524|GO:0016459
Vian6g00974 1559 PANTHER MYOSIN 126 1486 - -
Vian6g00974 1559 CDD MyosinXI_CBD 1200 1521 IPR037975 GO:0007015
Vian6g00974 1559 ProSiteProfiles IQ motif profile. 843 872 IPR000048 GO:0005515
Vian6g00974 1559 Gene3D - 752 818 - -
Vian6g00974 1559 Gene3D - 511 705 - -
Vian6g00974 1559 ProSiteProfiles IQ motif profile. 868 897 IPR000048 GO:0005515
Vian6g00974 1559 ProSiteProfiles IQ motif profile. 822 848 IPR000048 GO:0005515
Vian6g00974 1559 Gene3D - 324 382 - -
Vian6g00974 1559 FunFam unconventional myosin-Va 918 966 - -
Vian6g00974 1559 Pfam Myosin N-terminal SH3-like domain 81 123 IPR004009 GO:0003774|GO:0005524|GO:0016459
Vian6g00974 1559 SMART DIL_2 1373 1480 IPR002710 -
Vian6g00974 1559 ProSiteProfiles IQ motif profile. 939 968 IPR000048 GO:0005515
Vian6g00974 1559 SMART iq_5 867 889 IPR000048 GO:0005515
Vian6g00974 1559 SMART iq_5 915 937 IPR000048 GO:0005515
Vian6g00974 1559 SMART iq_5 819 841 IPR000048 GO:0005515
Vian6g00974 1559 SMART iq_5 842 864 IPR000048 GO:0005515
Vian6g00974 1559 SMART iq_5 938 960 IPR000048 GO:0005515
Vian6g00974 1559 ProSiteProfiles Myosin motor domain profile. 134 817 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vian6g00974 1559 ProSiteProfiles Dilute domain profile. 1196 1498 IPR002710 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vian6g00974 Vian-Chr6 26977849 26992663 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00974 76 1555 Myosins gene family AT1G17580 60.760 0.0 1857
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00974 K10357 - oeu:111412362 2021.13
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00974 6 26977849 26992663 Vian6g00974 6 26977849 26992663 ECH