Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian6g00974 | ATGGCGCGTCCTTTCCAAGAACCATTCGATCCTCATTCCACTTCTCACTTCGACTTCCACCTGCACCACCTTCACCTCACGCACCCTTCCATCTCCGCCTTCCTTCTCCTCACGCCTCAACCACGCCATCGCCATTCCCTTCTATACTTCTCTTTATGCTTCCTAAGCTCTCCAACACTCTCCGCTTTGCACCTCAATAATGCTCGTTATGCTGATGCTGGGAATCCAGTGAATATTACTGTGGGTTCTCATGTCTGGGTTGAAGATCCAGATGTATCTTGGATTGATGGACAGGTATCAAATATCAAGGGAAAGGATGCTGAAATTCATACAACCAATGGAAAGAAGGTGGTGACAAAGTTATCAAAAATATATCCCAAAGATATGGAAGCTCCTGCAGGTGGAGTGGATGATATGACTAAGCTTTCATATTTGCATGAGCCCGGAGTCCTGCAGAACTTAAAAACTAGATATGAATTGAATGAAATATATACTTATACTGGTAATATACTGATTGCAATAAATCCATTCCAAAGGCTACCTCATATTTATGATTCCCACATGATGCAACAATACAAGGGAGCACCATTTGGAGAGTTAAGTCCTCATGTATTTGCCATTGCTGATGTTGCATATAGGGCAATGATTCACGAAGGAAAAAGCAATTCAATTTTGGTCAGTGGGGAAAGTGGAGCTGGTAAAACTGAAACTACAAAAATGCTTATGAGATATCTTGCCTTCTTAGGTGGTAGGGCTGCCACTGAAGGTCGAACTGTTGAGCAACAAGTTCTTGAATCAAATCCAGTTCTGGAAGCATTTGGCAATGCTAAAACTGTCAGGAATAACAATTCCAGTCGTTTTGGTAAATTTGTTGAGATCCAATTTGACAAGAGTGGTAGAATCTCGGGAGCAGCCATTCGAACATACCTTCTGGAGAGATCTCGGGTCTGCCAGATTAATGATCCTGAACGCAACTACCACTGCTTTTATTTTCTTTGTGCTGCACCCCAGGAGGAAATTGATAAATACAAATTAGGAAGTCCTACAACATTTCATTACCTTAACCAGTCAAAATGCTATGACCTGGCTGATATAAGTGATTCTCGTGAGTATCTTGCTACCAGGAGAGCTATGGATATTGTTGGAATAAGCCAAAAAGAACAGGAAGCAATTTTCAGAGTTGTTGCTGCGATTCTTCATATAGGGAATATTGATTTTACAAAAGGCAAGGAAGTTGATTCATCAGTTCCAAAAGATGATAAAGCCAATTTCCACTTAAAAACTACTGCTGAGCTTCTTATGTGCGATGCTGGTTCCTTGGAAGATGCATTATGCAAGCGTGTCATGATCACCCCTGAGGAAGTTATAAAACGAAGCCTTGATCCAGAAAGTGCAGCAGTCAGCAGAGATGGCTTGGCAAAAACAATTTATTCTAGGCTCTTTGACTGGTTGGTGAACAAGATTAATAATTCAATTGGACAGGACTCCAGTTCTAAATCTTTGATTGGGGTGCTTGATATCTATGGTTTTGAAAGCTTTAAATCTAACAGTTTTGAGCAGTTCTGCATTAATTTCACAAATGAGAAGCTGCAGCAACATTTCAATCAGGCAACATCTCAGACCATGATAAGCACTTATCACGTGTTTAAGATGGAGCAAGAAGAATACACGAAGGAGCGGATCAATTGGAGCTACATTGAATTTGTTGACAACCAAGATGTCTTGGACCTTATTGAAAAGAAACCTGGAGGAATAATTGCACTCCTTGATGAGGCTTGTATGTTTCCAAAGTCCACACATGAAACATTTTCAAACAAACTTTATCAGACATTTAAGAATCACAAACGCTTTGTTAAGCCAAAACTGTCTCGAACAAATTTCATTATTTCTCATTATGCTGGCGAGGTGCACTACCAGTCTGATCAGTTTTTAGACAAAAACAAAGATTACGTGGTTGCTGAGCATCAAGATTTATTGAGTGCTTCCAATTGTCCATTTGTAGCAGGCCTTTTTCCTCCACTTCCAGAGGAGACATCCAAATCCTCTAAATTTTCTTCAATTGGTTCTCGATTTAAGCTGCAACTACAGCAATTAATGGAAATACTAAGCTCTACACAGCCTCATTACGTTAGATGTGTGAAACCAAACAACCTCCTCAAGCCTGCAATTTTTGAGAATTCCAATGTCATGCAGCAACTTCGCTGTGGTGTGAGTATGGGTGTTTTAGAGGCAATCAGAATCAGTTGTGCTGGCTACCCTACGCGCCGAGCTTTCTTTGAATTTATAAACCGATTTTCCCTTCTTGCTCCAGAGATCACAGAAATACATCATGATGAGAAGACTGTTTGCCTGAAGATTCTGGAAAAAGCAGGGCTTAAAGGATATCAGATTGGACAAACAAAGGTTTTCCTAAGAGCTGGTCAGATGGCTGAACTAGATGCACGGAGAGCTCAAATGCTTGGTAATGCAGCAAAAACTATTCAACGGCGTATACGAACCCATCAAGCTCGTAAACATTATCTTGCACTACGCAAGAACACTACAATTATGCAGGCTCTTTGGAGAGGAAGACTTGCATTCAAATTTTATAACAAATTGAGAAGGGATGCAGCTGCAGTGAAAATTCAGAAGAATATACGTAGATATGGAGCTATGAAATCCTATACTAAACTCAAAGCATCAGTGCTTACTGTGCAAACGGCTTTAAGGGCAATTGCTTCCCTCAAGGAGTTCAGATTTAGGAAACAGGCTAAGGCTTCCATCATTATTCAGGCTCAGTGGCAGTGCCACAAAGCTGCTTCATATTATAAGAAGCTCAAGAAAGGTTCAATTGTCACCCAATGCCGATGGAGGGGTCTCATGGCCAGGAGAGAACTTAGGAAACTGAAAATGAGCAACCTAGAAGAATCCAAAGCACAAGAGATAGCAAAAGTGCAGAATTTACTGCAGGAGATGCAGAACAAATTTGATGAAACCAATGCATTACTTATAAAGGAGCGTGAGGCTGCAAAGAAAGCTATTGATGAAGCACCCCCTGTTGTTAAAGAAACGCAGGTGATTGTTGAAGACACTCAGAAGATTGAATCACTAACAGTGGAAATTGAGAGTCTAAAGTGCACTTCAGAGTTCAGTGTATTCATTCATATGCGAATGAAAGTAGTTTTACTAGATCTTCAGTATAAAGGGGAGAAACAATATTTATTCCCATTTGTTGCTATGAGAAACAAAAGGCCTAACTTGGCTTTGATACTGATAGGCAATTCTGTTATCAGGAAAATCAGTGTGCGTGTGCCTGTGAGCTCCCTTGAGTCAGAGAAACAGAAAGCTGATGACTTTGAAATGAAATATGAAGAGTCCCAAGCTTATTGTGAAGAAAAGAGTAAATTATTAGAAGACACAGAGAAGAAGGTTCGTCAGCTACAAGAATCCATGACCAGGCTAGAAGAGAAAGTTGCTAATTCAGAATCAGAGAATCAAGTTCTACGTCAACAAGCTGTGTCAATGGCACCCAATAAGTTCCTCTCAGGACGTTCTAGATCCGTTATACAGCGACCAGATGGTGGACATGTTGGAACAGAAGCAAAGTCAACTTTGACGCAAGATAATAATGATGTCTTGGCTTATTGGTTATCCAATGCCTCTACACTGGTCTTGTTACTACAGCGCACACTAAAGGCAAGTGGTGCAGCTGGAATGGCTCCTCAACGTCGTCGATCTTCATCAGGGAGTCTGTTCGGGAGGGTGACACATAGTTTCCGTGGAACTCCAGCAGGAGTCACCCTTCCCCTAATCAATGGTAGCATGAGCAGTGTAGATACGTTAAAAGTTGAAGCCAAGTACCCTGCTCTCCTTTTCAAACAGCAGCTTACAGCTTATGTGGAAAAGATATATGGAATGATTCGAGATAACTTGAAGAAAGAAATTTCTCCCTTGCTTGGATTATGCATCCAGGCACCCAGAACATCCAGAGCGAGCTTGGTGAAAGGATCATCACGTTCAGTTGCAAACACTGAAGCCCAGAAAGCTTTGATTGCTCACTGGCAGGGGATAGTTAAGAGCCTTGGGAAATTCTTGAGTACTTTGAAAGCAAATCATGTTCCCCCATATTTGGTTCGTAAGGTGTTCACTCAAATTTTTTCTTTCATCAACGTCCAACTTTTTAACAGTCTTCTTCTAAGACGGGAGTGCTGCTCATTTAGTAACGGAGAATATGTGAAATCTGGTTTGGGTGAATTGGAGGATTGGTGCTCTGGCGCTACAGATGAGTACTGTGGTTCGGCATGGGATGAACTCAGACATATAAGACAGGCTATTGGATTTTTGGTCATACATCAGAAACCAAGGAAAACGCTGCATGAAATAAGTCATGACCTCTGCCCAGTCCTCAGCATACAGCAGCTGTATCGGATTAGCACCATGTACTGGGATGACAAATATGGCACACATAGCGTATCCCCTGATGTTATATCCAATATGAGAGAGTTGATGACTGAAGATTCTAATAACGCAGTCAGTAATTCTTTCCTGTTGGATGATGATTCAAGCATTCCGTTTTCTGTTGATGATTTGGCGAAGTCGAAGGAACTGATCGAGATGTCTGATTTAGAGCCCCCACAACTATTACGTGAAAACACTGGCTTTAGTTTTCTGTTGCCACGCCCAGACGGACAGATTTCGTAG | 4680 | 0.4135 | MARPFQEPFDPHSTSHFDFHLHHLHLTHPSISAFLLLTPQPRHRHSLLYFSLCFLSSPTLSALHLNNARYADAGNPVNITVGSHVWVEDPDVSWIDGQVSNIKGKDAEIHTTNGKKVVTKLSKIYPKDMEAPAGGVDDMTKLSYLHEPGVLQNLKTRYELNEIYTYTGNILIAINPFQRLPHIYDSHMMQQYKGAPFGELSPHVFAIADVAYRAMIHEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYFLCAAPQEEIDKYKLGSPTTFHYLNQSKCYDLADISDSREYLATRRAMDIVGISQKEQEAIFRVVAAILHIGNIDFTKGKEVDSSVPKDDKANFHLKTTAELLMCDAGSLEDALCKRVMITPEEVIKRSLDPESAAVSRDGLAKTIYSRLFDWLVNKINNSIGQDSSSKSLIGVLDIYGFESFKSNSFEQFCINFTNEKLQQHFNQATSQTMISTYHVFKMEQEEYTKERINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSNKLYQTFKNHKRFVKPKLSRTNFIISHYAGEVHYQSDQFLDKNKDYVVAEHQDLLSASNCPFVAGLFPPLPEETSKSSKFSSIGSRFKLQLQQLMEILSSTQPHYVRCVKPNNLLKPAIFENSNVMQQLRCGVSMGVLEAIRISCAGYPTRRAFFEFINRFSLLAPEITEIHHDEKTVCLKILEKAGLKGYQIGQTKVFLRAGQMAELDARRAQMLGNAAKTIQRRIRTHQARKHYLALRKNTTIMQALWRGRLAFKFYNKLRRDAAAVKIQKNIRRYGAMKSYTKLKASVLTVQTALRAIASLKEFRFRKQAKASIIIQAQWQCHKAASYYKKLKKGSIVTQCRWRGLMARRELRKLKMSNLEESKAQEIAKVQNLLQEMQNKFDETNALLIKEREAAKKAIDEAPPVVKETQVIVEDTQKIESLTVEIESLKCTSEFSVFIHMRMKVVLLDLQYKGEKQYLFPFVAMRNKRPNLALILIGNSVIRKISVRVPVSSLESEKQKADDFEMKYEESQAYCEEKSKLLEDTEKKVRQLQESMTRLEEKVANSESENQVLRQQAVSMAPNKFLSGRSRSVIQRPDGGHVGTEAKSTLTQDNNDVLAYWLSNASTLVLLLQRTLKASGAAGMAPQRRRSSSGSLFGRVTHSFRGTPAGVTLPLINGSMSSVDTLKVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQKALIAHWQGIVKSLGKFLSTLKANHVPPYLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKSGLGELEDWCSGATDEYCGSAWDELRHIRQAIGFLVIHQKPRKTLHEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRELMTEDSNNAVSNSFLLDDDSSIPFSVDDLAKSKELIEMSDLEPPQLLRENTGFSFLLPRPDGQIS | 1559 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian6g00974 | 1559 | SMART | MYSc_2a | 129 | 818 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Vian6g00974 | 1559 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 108 | 869 | IPR027417 | - | |
Vian6g00974 | 1559 | Pfam | IQ calmodulin-binding motif | 943 | 960 | IPR000048 | GO:0005515 | |
Vian6g00974 | 1559 | Pfam | IQ calmodulin-binding motif | 822 | 840 | IPR000048 | GO:0005515 | |
Vian6g00974 | 1559 | Pfam | IQ calmodulin-binding motif | 870 | 888 | IPR000048 | GO:0005515 | |
Vian6g00974 | 1559 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 870 | 965 | IPR027417 | - | |
Vian6g00974 | 1559 | Gene3D | - | 918 | 967 | - | - | |
Vian6g00974 | 1559 | Gene3D | - | 819 | 869 | - | - | |
Vian6g00974 | 1559 | Gene3D | - | 870 | 917 | - | - | |
Vian6g00974 | 1559 | Coils | Coil | 964 | 1002 | - | - | |
Vian6g00974 | 1559 | Pfam | DIL domain | 1374 | 1477 | IPR002710 | - | |
Vian6g00974 | 1559 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 384 | 683 | - | - | |
Vian6g00974 | 1559 | CDD | MYSc_Myo11 | 148 | 805 | IPR036018 | - | |
Vian6g00974 | 1559 | FunFam | Myosin 2 | 384 | 501 | - | - | |
Vian6g00974 | 1559 | Coils | Coil | 1123 | 1164 | - | - | |
Vian6g00974 | 1559 | Gene3D | Kinesin motor domain | 137 | 747 | IPR036961 | - | |
Vian6g00974 | 1559 | Pfam | Myosin head (motor domain) | 136 | 805 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Vian6g00974 | 1559 | PRINTS | Myosin heavy chain signature | 164 | 183 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Vian6g00974 | 1559 | PRINTS | Myosin heavy chain signature | 221 | 246 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Vian6g00974 | 1559 | PRINTS | Myosin heavy chain signature | 268 | 295 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Vian6g00974 | 1559 | PRINTS | Myosin heavy chain signature | 501 | 529 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Vian6g00974 | 1559 | PRINTS | Myosin heavy chain signature | 564 | 592 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Vian6g00974 | 1559 | FunFam | Myosin heavy chain | 324 | 379 | - | - | |
Vian6g00974 | 1559 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 80 | 129 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Vian6g00974 | 1559 | PANTHER | MYOSIN | 126 | 1486 | - | - | |
Vian6g00974 | 1559 | CDD | MyosinXI_CBD | 1200 | 1521 | IPR037975 | GO:0007015 | |
Vian6g00974 | 1559 | ProSiteProfiles | IQ motif profile. | 843 | 872 | IPR000048 | GO:0005515 | |
Vian6g00974 | 1559 | Gene3D | - | 752 | 818 | - | - | |
Vian6g00974 | 1559 | Gene3D | - | 511 | 705 | - | - | |
Vian6g00974 | 1559 | ProSiteProfiles | IQ motif profile. | 868 | 897 | IPR000048 | GO:0005515 | |
Vian6g00974 | 1559 | ProSiteProfiles | IQ motif profile. | 822 | 848 | IPR000048 | GO:0005515 | |
Vian6g00974 | 1559 | Gene3D | - | 324 | 382 | - | - | |
Vian6g00974 | 1559 | FunFam | unconventional myosin-Va | 918 | 966 | - | - | |
Vian6g00974 | 1559 | Pfam | Myosin N-terminal SH3-like domain | 81 | 123 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Vian6g00974 | 1559 | SMART | DIL_2 | 1373 | 1480 | IPR002710 | - | |
Vian6g00974 | 1559 | ProSiteProfiles | IQ motif profile. | 939 | 968 | IPR000048 | GO:0005515 | |
Vian6g00974 | 1559 | SMART | iq_5 | 867 | 889 | IPR000048 | GO:0005515 | |
Vian6g00974 | 1559 | SMART | iq_5 | 915 | 937 | IPR000048 | GO:0005515 | |
Vian6g00974 | 1559 | SMART | iq_5 | 819 | 841 | IPR000048 | GO:0005515 | |
Vian6g00974 | 1559 | SMART | iq_5 | 842 | 864 | IPR000048 | GO:0005515 | |
Vian6g00974 | 1559 | SMART | iq_5 | 938 | 960 | IPR000048 | GO:0005515 | |
Vian6g00974 | 1559 | ProSiteProfiles | Myosin motor domain profile. | 134 | 817 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Vian6g00974 | 1559 | ProSiteProfiles | Dilute domain profile. | 1196 | 1498 | IPR002710 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian6g00974 | Vian-Chr6 | 26977849 | 26992663 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian6g00974 | 76 | 1555 | Myosins gene family | AT1G17580 | 60.760 | 0.0 | 1857 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian6g00974 | K10357 | - | oeu:111412362 | 2021.13 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vian6g00974 | 6 | 26977849 | 26992663 | Vian6g00974 | 6 | 26977849 | 26992663 | ECH |