Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00941 ATGAGTGTGGAAGAAATGTTGGAGGCTTTGAGAAGCAGAAGTGGCCCTCTAGACGGTTCATATGTTAAGGCGGCCAGAGAACGTGATTTCATGACAGTCTATTCCAAGCATGTGCCAGTTGTTTCCAAACGAAAACATCAATACAAGAATACTCAAATCGTAGAGCCCAACAGCCCAGAAAACTTCCGGGTCATGTCTGAATTTAACACAACGGCAATGGCCGCCTTATCGACTTCTCAGCGTCACTTAGTGCCTCACCGCCAATCACTGTCACCAAATTACATGAACAAGACAGAATCTTCCAGGGCTAAAGCAAGGTCGCAGAGTGAACCGAGACAACGACCCAAAAGGGGAATGAGGAACAAAGGGAAGTCCGTGGAATCCCCATTGAATGGTCCAAGACAAAATCTGTTCTCAAACTCATTACGTTTCGATCATGGAAGCCTGGATCTTTGGCCTATCAATCTTCATGGGGACAGGAAGCGCGATTCCTTTGGCAGCAGCTCGGTCACTACTGATTCCTATTATTGA 531 0.4652 MSVEEMLEALRSRSGPLDGSYVKAARERDFMTVYSKHVPVVSKRKHQYKNTQIVEPNSPENFRVMSEFNTTAMAALSTSQRHLVPHRQSLSPNYMNKTESSRAKARSQSEPRQRPKRGMRNKGKSVESPLNGPRQNLFSNSLRFDHGSLDLWPINLHGDRKRDSFGSSSVTTDSYY 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00941 176 MobiDBLite consensus disorder prediction 78 139 - -
Vian6g00941 176 MobiDBLite consensus disorder prediction 78 102 - -
Vian6g00941 176 MobiDBLite consensus disorder prediction 103 123 - -
Vian6g00941 176 MobiDBLite consensus disorder prediction 155 176 - -
Vian6g00941 176 Pfam Protein of unknown function (DUF4005) 58 122 IPR025064 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00941 89 148 IQD Protein Family AT4G10640 43.333 4.84e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00941 - - var:108318790 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00941 6 26651529 26652059 Vian6g00941 6 26651529 26652059 ECH