Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00922 ATGGCCTCAGCTTCTTCTTCTCCAAAGTTTACAGTGCGAAGGTGCCAACCCCAGTTGGTAGTTCCTGCTGTCCCCACTCCTCACGAAGTTAAGCCACTTTCCGACATTGATGATCAAGAAGCCCTGCGTTTCCACGTTCCCTTCATACAAATTTATCGAAAGCAAGCATCAATGGCAGAGAAAGACCCAGTTCAAGTCATTCGCCAAGCACTCTCGCAAACACTTGTCTTCTATTACCCATTTGCGGGTAGGCTTAGGGAGGGGCCTCACCGCAAATTGATGGTGGATTGCACCGGAGAAGGTGCCATGTTCGTTGAGGCCGATGCTGACGTCACACTCGACCAGTTCGGGGATTCTCTCCAGCCTCCATTCCCATGCTTCCATGAACTGCTATACCATGTTCCTGCCTCACACCAAATTACCAACACTCCCCTTCTACTCGTACAGGTGACACGCCTTAGATGCGGTGGTTTCATCTTGGCCTTCTGCTTCAACCACATCATGTGTGACGGAGCTGGTCTTTCACAATTCATGAGCACGTGGGTTGAAATGGCTCATGGTGCAACAAAACCTTCCATTCCACCAGTTTGGAGAAGGGAGCTTCTAATGGCAAGACATCCACCTCGCATCACATGCAACCATCGCGAATACGAACATGTCCCAGACACAGTCAAAGGAACCCACGCATCAAACGATCATGACATGGTTCTTCGGTCGTTCTTCTTTGGACCTTCCCAAATTGCTGCTATTCGTGGCTTGGTTCCGCTCCACCTTCAGCACTGCACAACGTTTGATCTCATCACAGCATGTATCTGGCGCTGTCGTACAAAAGCATTGCAGATAAAGGCAGACGAGGATGTTCGCATGATGGTGATAGTGAATGGGCGTGGAAGATTGAATCCTCGTTTACCAGTTGGCTACTACGGCAATGCTATTGCATACCCTGCAGCAGTTACGACTGCAGGGAAGCTTTGTGAAAATCCGGTTGGGTACGCAGTGGAGTTAATAAAGAAATTGAAAGGTGAGGTGACAGAAGAGTACATGCATTCGGTGGCAGATTTGATGGTGATTAAAGATCGGTGCATGATTACAACTGTAAGGTCTTGTATCATTTCAGATTTGACACGTTTGAAGCTTAGAGAAGCGGATTTTGGGTGGGGTGAGGCTGTGTACGGTGGAGTGGCTGAAGGTGGAGCTGGGAGCTTTCTTGAAGCAACGTATCAGGTTTTGCATAGGAGTGCAAAAGGAGAAGAAGGCATCGTCTTACCAATTTGGTTGCCTGCTAAAGCTATGGATAGGTTTGCGAAAGAGTTGGATGCCATGTTTAGCAACCAAAACCAATCTAATACCGGGAGTCCTAGTTTAACCATGTCTACCTTATAG 1383 0.4808 MASASSSPKFTVRRCQPQLVVPAVPTPHEVKPLSDIDDQEALRFHVPFIQIYRKQASMAEKDPVQVIRQALSQTLVFYYPFAGRLREGPHRKLMVDCTGEGAMFVEADADVTLDQFGDSLQPPFPCFHELLYHVPASHQITNTPLLLVQVTRLRCGGFILAFCFNHIMCDGAGLSQFMSTWVEMAHGATKPSIPPVWRRELLMARHPPRITCNHREYEHVPDTVKGTHASNDHDMVLRSFFFGPSQIAAIRGLVPLHLQHCTTFDLITACIWRCRTKALQIKADEDVRMMVIVNGRGRLNPRLPVGYYGNAIAYPAAVTTAGKLCENPVGYAVELIKKLKGEVTEEYMHSVADLMVIKDRCMITTVRSCIISDLTRLKLREADFGWGEAVYGGVAEGGAGSFLEATYQVLHRSAKGEEGIVLPIWLPAKAMDRFAKELDAMFSNQNQSNTGSPSLTMSTL 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00922 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 18 439 - -
Vian6g00922 460 Gene3D - 232 443 IPR023213 -
Vian6g00922 460 Gene3D - 6 219 IPR023213 -
Vian6g00922 460 SUPERFAMILY CoA-dependent acyltransferases 128 189 - -
Vian6g00922 460 Pfam Transferase family 15 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00922 Vian-Chr6 26486055 26487524 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00922 19 393 Monolignol Biosynthesis Gene Families AT5G48930 31.443 6.07e-54 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00922 K19861 - gmx:100792864 655.981