Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00920 ATGAAATCACAGGTGACACGCCTTAGATGCGGTGGTTTCATCTTGGCCTTCTGCTTCAACCACATCATGTGTGACGGAGCTGGTCTTTCACAATTCATGAGCACGTGGGCTGAAATGGTTCGTGGTCCAACCAAACCTTCCATTCCACCTGTGTGGTGTAGGGAACTCCTGATGGCAAGACATCCACCTCGTATTACATGCAACCATCGCGAATTCGAACATGTCCCAGACACAGTCAAAGGATCAAACCAACATGACATGGTCCTTCGATCGTTCTTCTTTGGACCTTCCCAAATAGCTACTATTCGTGGCTTGGTTCCACCTCACCTTCGGCACTGCACAACGTTTGATCTCATCACGGCATGCTTCTGGCGCTGTCGTACAAAAGCATTGCAGATAGAGGCAGACGAGGATGTTCGCATGATGGTGATAGTGAATGCACGTGCAAGGTTGAATCCTCCTTTACCAGTTGGCTACTACGGCAATGCTATTGCATACCCTGCAGCAGTTACCACTGCAGGGAAGCTTTGTGAAAATCCGTTTGGGTATGCTGTGAATTTGATAAATAAAGTGAAGGGTGAGGTGACAGAAGAGTACGTGCATTCTGTGGCGGATCTAATGGTGTCTAAGGGACGGTGCTCTTTCACAACGGTGAGATCTTTCATTGTGTCCGATCTGAGACGTTTTAGTTTCAGAGAAATTGATTTTGGTTGGGGTAAAGCATTGTATGGTGGAATAGCCAAAGCTGGAGCTGGAGCATTTCCTGCAGTAATATATCTGACATCGCATGAGAATGCAAATGGAGAAGAAGGTGTAGTGATACCAATTTGGTTGCCTGCCAAAGCCATGGAAAGGTTTGAACACGAGTTAAGTGACATGCTTCGAAACTAA 891 0.4658 MKSQVTRLRCGGFILAFCFNHIMCDGAGLSQFMSTWAEMVRGPTKPSIPPVWCRELLMARHPPRITCNHREFEHVPDTVKGSNQHDMVLRSFFFGPSQIATIRGLVPPHLRHCTTFDLITACFWRCRTKALQIEADEDVRMMVIVNARARLNPPLPVGYYGNAIAYPAAVTTAGKLCENPFGYAVNLINKVKGEVTEEYVHSVADLMVSKGRCSFTTVRSFIVSDLRRFSFREIDFGWGKALYGGIAKAGAGAFPAVIYLTSHENANGEEGVVIPIWLPAKAMERFEHELSDMLRN 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00920 296 Gene3D - 71 290 IPR023213 -
Vian6g00920 296 Pfam Transferase family 4 292 - -
Vian6g00920 296 SUPERFAMILY CoA-dependent acyltransferases 72 202 - -
Vian6g00920 296 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 288 - -
Vian6g00920 296 Gene3D - 1 70 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00920 Vian-Chr6 26465919 26466809 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00920 4 290 Monolignol Biosynthesis Gene Families AT5G48930 25.497 5.15e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00920 K19861 - gmx:100787907 458.759