Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00919 ATGGATTCATCATCTTCCTGTCCACCGTTTACTATGCATAAATGCAAACCTGAGCTAGTGACTCCTTCAATACCCACTCCCGACGAAACTAAACTATTATCTGAAATAGATGATCAAAACTACCTTCGTTTGCATTATTCAATAATACAAATCTATCAAAATGAATCATCAATGGCGAATAAAGACCCAGTAAGAGTGATTCGGCAGGCACTGGCACAAGCACTGGTTTTCTATTACCCATTTGCAGGTAGGCTTAGGGAGGGTCGTGGCCACAAATTAATGGTGGATTGCACCGGAGAGGGTGTCATGTTCATTGAGGCTGACGCTGACGTAACACTGGATCAGTTTGGTGACAATCTTCAACCTCCATTCATACACTCTAAGGCATTTATGTGTGACGTTGCAGAATCCGAAGATATTAAAAATTTGCCTCTTCTACTCATCCAGGTGACAAGACTCAAGTGTGGTGGTTTCGTGGTGTCGACAGGGTGGAACCACGTGATGGCAGACGGAGCTGGTTTGTCACAGTTCATGCAAGCATGGGCTGAAATGGCTCGAGGTATAAAGACTCCTTCCATTTCACCTCTCTGGAGAAGGGAGCTTCTAATGGCAAGAGATCCACCTCGCATTACATGCAACCATCGTGAATACGACCAAATCCATGACGACAACCTCAATTCTCCCGACCTGGTTCATCGATCATTCTTCTTCGGACCTGCTCAGATGGCTGCCCTTCGTGGTTTGCTTCCCCGTCAGCTTCGACAGTGCACCGCATTCGATCTCATCACGGCATGCTTCTGGCGTTGTCGCACAAGAGCGATGCAAATAGACGCAGACGAGGATGTTCGCATGATGTGCATCGTGAACGCGCGTAACAGGTTCCGTCCTCCGTTGCCTGTTGGTTACTACGGCAACGCTTTTGCATACCCCGCCGCAATGACCACCGCGGGAAAGCTCTGCGCAAATCCGTACGCATATGCGGTGGAGTTGATTCACAAGGTGAAGGGTGAGGTGACAGAGGAGTATATGCATTCGGTGGCGGATCTAATGGTGCTTAAGGGACGGTGCATGCCGACAACGGTAAGGTCTTGTTTGGTGTCAGACCTGACTCGTGCTAGGTTTAGGGACGTTGATTTTGGATGGGGCAAGGCTTTGTCTGGTGCACCAGCCAAAGGTAGCACTGGACCCTTTTACGGAGGAACACACATTGTGTCGTATAAGAATTCGAAAGGAGTAGATGGGTTGGTGTTACCAGTTTGGATGCCCGCAGAAGCCATGTCCATGTTCGTGAAAGACATGGAAGATATGATTAGTGGCAACCAAAACCAGCAGAACCACCCTACAAAAGCTGCTTCTTTTATCAGGTCTACCATGTAG 1377 0.4822 MDSSSSCPPFTMHKCKPELVTPSIPTPDETKLLSEIDDQNYLRLHYSIIQIYQNESSMANKDPVRVIRQALAQALVFYYPFAGRLREGRGHKLMVDCTGEGVMFIEADADVTLDQFGDNLQPPFIHSKAFMCDVAESEDIKNLPLLLIQVTRLKCGGFVVSTGWNHVMADGAGLSQFMQAWAEMARGIKTPSISPLWRRELLMARDPPRITCNHREYDQIHDDNLNSPDLVHRSFFFGPAQMAALRGLLPRQLRQCTAFDLITACFWRCRTRAMQIDADEDVRMMCIVNARNRFRPPLPVGYYGNAFAYPAAMTTAGKLCANPYAYAVELIHKVKGEVTEEYMHSVADLMVLKGRCMPTTVRSCLVSDLTRARFRDVDFGWGKALSGAPAKGSTGPFYGGTHIVSYKNSKGVDGLVLPVWMPAEAMSMFVKDMEDMISGNQNQQNHPTKAASFIRSTM 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00919 458 Gene3D - 9 215 IPR023213 -
Vian6g00919 458 Gene3D - 216 432 IPR023213 -
Vian6g00919 458 MobiDBLite consensus disorder prediction 439 458 - -
Vian6g00919 458 Pfam Transferase family 15 436 - -
Vian6g00919 458 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 18 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00919 Vian-Chr6 26460745 26462215 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00919 19 431 Monolignol Biosynthesis Gene Families AT5G48930 28.837 1.46e-52 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00919 K19861 - gmx:100792864 605.905