LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian6g00917	ATGTGTGATGGACCCGGTTACGAACAATTCATGAGCGCGTGGGCGGAAATGGCTAGAGATGCAACCAAACCTTCCATCGAACCAGCGTGGCGTAGGGAGCTCCTAATGGCAAGAGACCCACCTCGCATTACATGCAACCATCGTGAATTCGAGAAAGTCCAAGATACCCTTCCTTCTTCAGACCAAAACATGGTTCAACGATCATTCTTCTTTGGACCACTCGATATAGCTGCACTTCGGCGCTTGATTCCCCAACACCTTCAGCACTGCACCACATTTGATCTCATCACAGCATGCCTTTGGCGCTGTCGCACAAAAGCACTGCAAATAGAAGCAGACGAGGATGTTCGCATGATGTGCATAGTCAACGCACGTGGTCGGTTCAATCCACCACTTCCTGTTGGTTACTACGGCAACGGTTTTGCATATCCGGCGGCAGTAACGACTGCAGGGAAGCTTTGCAGAAACCCATTTGGGTATGCGGTGGAGTTGATAAATAAAGTGAAAGGTGAGATGACAGAAGAGTACCTGCAATCTGTTGCAGACCTGATGGTGATGAAGGGACGATGCTTATTCACAACTGTGAGGTCTTATATTGTGTCACATTTGGCACGTTTTAACCTTAGAAAAGTGGATTTTGGTTGGGGTGAGGCTGTGTACGGTGGAGTGGCTAAAGCTGGGGCTGGGAGCTTCTTAGGAGTTTCGTTTTTCTGTTCTGCTAAGAATGGAAAAGGTGAAGAAGGCATAATATTTCCGATTTGCTTACCTGCTGATGCTATGGAAAGGTTTGCTGAAGAGTTTAGCCACATGCTAGGCAACAAAAATCAACCTGAAACCAGTTCTGCTCCTTTTATAAAGTCTACCCTCTAA	870	0.4701	MCDGPGYEQFMSAWAEMARDATKPSIEPAWRRELLMARDPPRITCNHREFEKVQDTLPSSDQNMVQRSFFFGPLDIAALRRLIPQHLQHCTTFDLITACLWRCRTKALQIEADEDVRMMCIVNARGRFNPPLPVGYYGNGFAYPAAVTTAGKLCRNPFGYAVELINKVKGEMTEEYLQSVADLMVMKGRCLFTTVRSYIVSHLARFNLRKVDFGWGEAVYGGVAKAGAGSFLGVSFFCSAKNGKGEEGIIFPICLPADAMERFAEEFSHMLGNKNQPETSSAPFIKSTL	289

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian6g00917	289	Gene3D	-	60	273	IPR023213	-
	Vian6g00917	289	Pfam	Transferase family	1	270	-	-
	Vian6g00917	289	Gene3D	-	1	52	IPR023213	-
	Vian6g00917	289	PANTHER	TRICHOTHECENE 3-O-ACETYLTRANSFERASE	1	263	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian6g00917	Vian-Chr6	26419715	26420584	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vian6g00917	2	267	Monolignol Biosynthesis Gene Families	AT5G48930	25.979	5.47e-22	93.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian6g00917	K19861		-	var:108341556	590.882