Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00916 ATGGCCTCATCATCATCTTCTTCTTCTCTAAACTTTACAGTGCGAAGGTGCCAACCCCAGCTGGTGCCTCCTGCTATCCCCACTCCTCATGAATTTAAACCACTTTCCGACGTTGATGATCAAGAAGCCCTGCGTTTCCACGTTCCGATGATACAAATCTATCCAAAGCAAGCATCAATGGCAGAAAAAGACCCAGTTCAAGCGATTCGCCAAGCACTCTCGCAGACACTTGTCTTCTATTACCCATTTGCGGGTAGGCTTAGAGAGGGGCCTAACTGCAAATTGATGGTGGATTGCACTGGAGAAGGTGCCATGTTCATTGAGGCCGATGCAGACGTCACACTTGATCAGTTTGGCGATTCTCTTTACCCTCCATTCCCATGCTTCCATGAACTTCTATACGATGTCCCTGGCACACAACAAATTACCAACACTCCCCTTCTACTTGTACAGGTGACACGGCTCAAGTGTGGTGGTTTCATCTTAGCCATCGGCCTCAACCACACCATGTGCGATGGACCCGGTTACGAACAATTCATGAGCGCTTGGGCGGAAATGGCTAGAGGTGCAACCAAACCTTCCATTGCACCAGTGTGGCGTAGGGATCTCCTAATGGCAAGAGACCCACCTCGCATTACATGCAACCATCGCGAATTCGAGCAAGTCCAAGATACCCTTCCTTCTTCCAACCAAAACTTGATTCAACGATCATTCTTCTTTGGACCACTCGAAATGGCTGCACTTCGGCGCTTGATTCCCAAACACCTTCAGCACTGCACCACATTTGATCTCATCACAGCATGCCTCTGGCGCTGTCGCACAAAAGCACTGCAAATAGAGGCAGACGAGGATGTTCGCATGATGTGCATAGTCAACGGACGTGGTCGGTTCAATCCTCCACTTCCTGTTGGTTACTACGGCAACTGTTTTGCATATCCGACAGCAGTAACGACTGCAGGGAAGCTATGCAGAAACCCATTTGGTTATGCGGTGGAATTGATAAATAAAGTGAAAGGTGAGATGTCAGAAGAGTACCTGCAATCTGTTGCAGACCTTCTGGTGATGAAGGGACGATGCTTATTCACAACTGTGAGGTCTTGTATTGTGTCATATTTGGCACGTTTGAACCTTAGAGAAGTGGATTTTGGTTGGGGTGAGGCTGTGTACGGTGGAGTGGCCGAAGCTGGGGCTGGGAGCTTCTTAGGAGCTTCGTATTTCTGTTCTGCTAAGAATGGAAAAGGAGAAGAAGGCATAATATTTCCGATTTGGTTACCTGCTGAAGCTCTGGAAAGGTTTGCTGAAGAGTTTAACCACATGCTAGGCAACAAAAACCAACCTCAAACCAGTTCTGCTACTTTTATAATGTCTACCCTCTAA 1377 0.4771 MASSSSSSSLNFTVRRCQPQLVPPAIPTPHEFKPLSDVDDQEALRFHVPMIQIYPKQASMAEKDPVQAIRQALSQTLVFYYPFAGRLREGPNCKLMVDCTGEGAMFIEADADVTLDQFGDSLYPPFPCFHELLYDVPGTQQITNTPLLLVQVTRLKCGGFILAIGLNHTMCDGPGYEQFMSAWAEMARGATKPSIAPVWRRDLLMARDPPRITCNHREFEQVQDTLPSSNQNLIQRSFFFGPLEMAALRRLIPKHLQHCTTFDLITACLWRCRTKALQIEADEDVRMMCIVNGRGRFNPPLPVGYYGNCFAYPTAVTTAGKLCRNPFGYAVELINKVKGEMSEEYLQSVADLLVMKGRCLFTTVRSCIVSYLARLNLREVDFGWGEAVYGGVAEAGAGSFLGASYFCSAKNGKGEEGIIFPIWLPAEALERFAEEFNHMLGNKNQPQTSSATFIMSTL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00916 458 Pfam Transferase family 17 439 - -
Vian6g00916 458 Gene3D - 8 221 IPR023213 -
Vian6g00916 458 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 20 429 - -
Vian6g00916 458 Gene3D - 230 442 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00916 Vian-Chr6 26402483 26404192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00916 45 436 Monolignol Biosynthesis Gene Families AT5G48930 30.392 3.05e-55 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00916 K19861 - pvu:PHAVU_006G098400g 748.814