Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00913 ATGGCACCGGTGGATCTGTCTACTATTAGTCTCCGGCCATTCAAGATCAGTGATGTCGATGATTTTTTCTTGTGGGCAGGGGATGATCAAGTGACTAGAAATCTCCGATGGAAAACGTGTGGCTCCAAGGAAGAGGCTTTGGCCTTCATAAGGGATGTTTGCATACCTCATCCATGGCGTCGCTCAATCTGCCTTGACTGTTCCATCGGCTTTATTTCAGTATTTCCTTGGTCAGGTGAAGAAAGGCACAAGGCCGACATAGGCTATGCCATTGGGAGGACCTACTGGGGCCAAGGGATAGCCACCAAAGCGCTCAAGATTGCTGTGCCTCAAGTCTTCAAGGACTTTCCCAATTTGCTGAGGTTGCAGGCTTTTGTTGACGTTGAAAACAAAGCTTCTCAGAGGGTGTTGGAAAAAGTTGGATTCATCAGAGAGGGTGTTCTCAGAAAGTATATTTGTATTAAAGGGGTGATTAAGGATTCTGTTCTGTATAGTTTCTTGTCAACGGAAGAAGTTCTTGCCGGTGACTAG 531 0.4633 MAPVDLSTISLRPFKISDVDDFFLWAGDDQVTRNLRWKTCGSKEEALAFIRDVCIPHPWRRSICLDCSIGFISVFPWSGEERHKADIGYAIGRTYWGQGIATKALKIAVPQVFKDFPNLLRLQAFVDVENKASQRVLEKVGFIREGVLRKYICIKGVIKDSVLYSFLSTEEVLAGD 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00913 176 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 8 170 - -
Vian6g00913 176 Pfam Acetyltransferase (GNAT) domain 10 142 IPR000182 GO:0016747
Vian6g00913 176 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 164 IPR000182 GO:0016747
Vian6g00913 176 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 9 167 IPR016181 -
Vian6g00913 176 Gene3D - 7 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00913 Vian-Chr6 26368426 26368956 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vian6g00913 Acetyltransf_3 3.8e-23 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00913 - - vra:106775254 343.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00913 6 26368426 26368956 Vian6g00913 6 26368426 26368956 ECH