Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00904 ATGGGTACTGAAATAAGTTACGCACTTTCAAAATTGCATATGCTATCCACTTCAGATTATGCCTCCGTTGTGTCCATGAACATTTTTGTGGCTCTGCTGTGTACTTGCATTGTCATTGGTCATCTTCTTGAGGAGAATCGCTGGGTGAATGAATCTATCACTGCCCTTTTTATAGGTGTTTGCACTGGTGTAGTCATTCTGTTGCAAAGTCGCGGCAAAAGCTCGCATCTTCTAGTTTTCAGCGAAGATCTTTTCTTTATATACCTTCTGCCTCCTATCATATTTAATGCAGGGTTTCAAGTGAAAAAGAAACGGTTCTTTGTTAACTTCATGACCATTATGCTTTTTGGAGCTGTTGGTGTCATACAAATTTTTAAGAGAATGGGTGTTGGAAAATCACTGGAGATAGGAGATTATCTAGCAATTGGGGCAATATTTGCTGCAACAGATTCAGTGTGCACATTGCAGGTGCTAAACCAGGATGAGACACCTTTACTATATAGTCTTGTGTTTGGCGAGGGTGTTGTTAACGATGCTACATCTGTTGTGCTTTTCAATGCAATCAAAAGTTTTGATCTCGACATAATTGACCACAGAATTGGTTTACATTTTTTCGGCAATTTCTTCTACCTGTTTATCGCAAGCACCATGCTTGGTGTCCTGGCCGGTCTACTCAGCGCTTACATTATTAAAACGCTTTATATTGGCAGGCACTCTACAGATCGCGAGGTTGCTCTCATGATGTTAATGGCATACCTTTCCTACATTCTAGCTGAATTATGGTATCTGAGTGGCATTCTCACTGTATTCTTCTGTGGGATTGTTATGTCACATTATACTTGGCATAATGTGACTGAGAGCTCAAGAATCACTACCAAACATGCTTTTGCAACTCTCTCTTTTGTTCTTGAAACCTTTATCTTCCTTTATGTTGGTATGGATGCGTTGGACATTGAAAAGTGGAGGTTTGTTAGCGATAGGCCGAAAACATCTGTTGCTGTTAGTTCAGTTTTATTGGGTCTCGTACTTGCCGGAAGAGCAGCATTTGTTTTTCCCCTATCCTTCTTATCAAACCTCACTAAAAAATCTCAAAGTGAAAAAATAAGCTTCAGGGAGCAGGTGATCATTTGGTGGGCTGGTCTTATGAGAGGTGCTGTTTCAATGGCTCTTGCCTATAATCAGTTCACCTTGTCAGGTCACACTGAACTGCGAACCAATGCCATCATGATCACCAGCACCATCACTGTCGTGCTTGTCAGCACAGTGGTGTTTGGTTTGATGACCAAGCCACTCATAAGGTTTTTGCTGCCAGTTAGTCCACCTCCTAAACGCAAGAACAGCTTGGGAAATATGGAATCATCTAATAATCCTCCAAAATCAATCACTGTGCCCTTTCTTGGAGGCTCTCAGGATTCTGAAAACGAACTTGATGGCAATGAAGATCATCGTCCAAACACTATTCGTGCCTTACTAAGCACTTCAACTCATAATGTTCATCACTTATGGCGTACGTTTGATAATTCAGTCATGCGTCCAGTTTTCGGCGGTAGGGGATTTGTTCCTGTGGCTACTGCTTCACCAACTGGCAGAAGTAATAGTCAACAGTGGCATTAA 1614 0.4151 MGTEISYALSKLHMLSTSDYASVVSMNIFVALLCTCIVIGHLLEENRWVNESITALFIGVCTGVVILLQSRGKSSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKRFFVNFMTIMLFGAVGVIQIFKRMGVGKSLEIGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIKSFDLDIIDHRIGLHFFGNFFYLFIASTMLGVLAGLLSAYIIKTLYIGRHSTDREVALMMLMAYLSYILAELWYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATLSFVLETFIFLYVGMDALDIEKWRFVSDRPKTSVAVSSVLLGLVLAGRAAFVFPLSFLSNLTKKSQSEKISFREQVIIWWAGLMRGAVSMALAYNQFTLSGHTELRTNAIMITSTITVVLVSTVVFGLMTKPLIRFLLPVSPPPKRKNSLGNMESSNNPPKSITVPFLGGSQDSENELDGNEDHRPNTIRALLSTSTHNVHHLWRTFDNSVMRPVFGGRGFVPVATASPTGRSNSQQWH 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00904 537 PANTHER SODIUM/HYDROGEN EXCHANGER 15 514 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Vian6g00904 537 MobiDBLite consensus disorder prediction 444 483 - -
Vian6g00904 537 Pfam Sodium/hydrogen exchanger family 28 432 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vian6g00904 537 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vian6g00904 537 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vian6g00904 537 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vian6g00904 537 Gene3D - 136 187 - -
Vian6g00904 537 MobiDBLite consensus disorder prediction 446 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00904 Vian-Chr6 26239795 26244026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00904 10 532 Antiporters AT3G05030 73.507 0.0 784
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00904 - - gmx:100789667 916.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00904 6 26239795 26244026 Vian6g00904 6 26239795 26244026 ECH
Vian6g00904 6 26239795 26244026 Vian3g01342 3 14827245 14832598 PCT