Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00859 ATGACTGAGATGGCGAAAGCGCCGAGAAAGAAGGCACTGCAGGAATGGCGCTGCCATGCCCTCCGCGCCGGCCAGTACCGCACTGGCTTCGGCGCTATACTCTCCGCCGGCACCTTCGTCTCCGCCCTCGTCGTCGGCTTCGTCGCCATCTACGCCGCGCCCTTCTCCGTCGATCCCGCGCCTTTCGTTAGGGATGTTCTCTTCTACCTCACCGCTGCAATGTTCCTCTTCTACGTATACCTTAGCGCCGAGATTTTCCTTTGGCAGGCCGTCGGCTTCGTTGCCTTCTACTTGTTCTTCGTAGGGTTTGTCTTCTACATGGATTTGGGGATGGCGGATCGCGCTCAAAAGAGTTCCGCGGATCTCGAGAGACAGTTGGAATCGGATCCTGACGCTGTGGTTTCTAGATCAGTCGAGGGAGAGAAACGCGCTTCTGGAGTGCGTGGAGCGTTTCGATTGTATAGTCGATCATTCTTCTTGAGTACAAAGTTTAGGGAATTTTATGTATTGCATGGATATGTTTCTAATTCTGGTTCTTTACGATATTGCTTAATCACTCTTCTTGAGGCAGTCCTGACTTTTTCATCCCTTGCCCTATGCACTCAGATTTCTAAAACATGGGAGCTTCCTGTGGAAACTGTCCTCAGATTGACGATACCTCAACCAGCACCAGCACAATGGAGCAGATTTTATGCATCAGCCAATATTGCACTTTGTCCACTGGCCCTCTTGTACGCCTGCAACTCGTTCATGCCATTTAATCACTCCATAGTTTTCCTCCTCCCCAACACTCACTTTCCCCTCTGGTCAGTAGTTTTAATGACAAGTTTCTCTCTTGCATTTCTTCATTTTATAATCGAAAAGGAACCCCCCAAAACAGAGCATCTGCCCGTGGTTGTCATGGCATTTGTGATGAGCGTGTTCTGGATATCTACTACAGCTGGAGAGCTGGTGAACTGCCTGGAAGCTATAGGCACACATCTCAAACTGCCCCCAGCACTCCTGGGTCTTACTGTGCTGGCATGGGGAAATTCAGTAGGTGATCTTGTTGCCGATGTTGCAGTTGCTAAAGCCGGTCATCCGGCAATGGCGATGGCGGGATGTTTCGCCGGACCAATGTTCAACATGCTTGTTGGCCTTGGAAGTGCATTAGTCATACAGACGGCCAATGTATATCCTAGAGCTTATCAGCTTAATTTCCACGTTGGTATAGTCATCGCATTTGTATTCCTGCTTTTAAGCCTTATGGGGTCTCTCTTAGTGATCACTTGGTGCAGATTCAGAGTGCCTAGGTTTTGGGGATTCTGTCTAGTAGGCATCTATGCTGCTTTTACGGCGGCAAGTTTAGGAATAGCCATGTTCTCAGGGTGA 1371 0.4945 MTEMAKAPRKKALQEWRCHALRAGQYRTGFGAILSAGTFVSALVVGFVAIYAAPFSVDPAPFVRDVLFYLTAAMFLFYVYLSAEIFLWQAVGFVAFYLFFVGFVFYMDLGMADRAQKSSADLERQLESDPDAVVSRSVEGEKRASGVRGAFRLYSRSFFLSTKFREFYVLHGYVSNSGSLRYCLITLLEAVLTFSSLALCTQISKTWELPVETVLRLTIPQPAPAQWSRFYASANIALCPLALLYACNSFMPFNHSIVFLLPNTHFPLWSVVLMTSFSLAFLHFIIEKEPPKTEHLPVVVMAFVMSVFWISTTAGELVNCLEAIGTHLKLPPALLGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGSALVIQTANVYPRAYQLNFHVGIVIAFVFLLLSLMGSLLVITWCRFRVPRFWGFCLVGIYAAFTAASLGIAMFSG 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00859 456 Gene3D - 231 449 IPR044880 -
Vian6g00859 456 Gene3D - 17 140 IPR044880 -
Vian6g00859 456 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 20 454 - -
Vian6g00859 456 Pfam Sodium/calcium exchanger protein 20 105 IPR004837 GO:0016020|GO:0055085
Vian6g00859 456 Pfam Sodium/calcium exchanger protein 300 449 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00859 Vian-Chr6 25747717 25749960 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00859 20 455 Antiporters AT1G08960 65.604 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00859 K13754 - gmx:100775437 664.455