Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00857 ATGACGAGTCAGAGTTTTTTAATTATTCATATCACCCAGATAGCCGTGGCTTTGCATATTATGGTGCATCTCTGCCATCCTGGTGTCGTGCACATATCCCTATGGGATGGTATCATTCCCTCTAAAGAGCATGCGAAGTTTTGGATTCACACATCAAATAAGTACCGATTCATTGACCAGGGAAGCAATTTGCGTAGCAAAGAATATAACCTTACCATGCATTGGCATGTTATGCCAAAGACTGGCAAAATGTCTGCAGATAAAATAGTCATGTCGGCCCTCCGCGCCGGCCAGTACCGCACTGGCTTCGGCGCTATACTCTCTGCCGGCACCTTCGTCTCCGCCCTCGTCGTGGGCTTCGTCGCCATCTTCGCCGCGCCCTTCTCCGTCGATCCCGCGCCTTTCGTTAGGGATGTTCTCTTCTACCTCACCGCTGCAATGTTCCTCTTCTACGTATACCTTAGCGCCGAGATTTTCCTTTGGCAGGCCGTCGGCTTCGTTGCCTTCTACTTGTTCTTCGTAGGGTTTGTCTTCTACATGGATTTGGGGATGGCGGATCGCGCTCAAAAGAGTTCCGCGGATCTCGAGAGACAGTTGGAATCGGATCCTGACGCTGTGGTTTCTACATCCGTCGAGGGAGAGAAACGCGCTTCTGGGGTGCGTGGAGCGTTTCGATTGATTTCTAAAACATGGGAGCTTCCTGTGGAAACTGTCCTCAGATTGACGATCCCTCAACCAGCACCAGCACAATGGAGCAGATTTTATGCATCAGCCAATATTGCACTTTGTCCACTGGCCCTCTTGTACGCCTGCAACTCGTTCATGCCATTTAATCACTCCATAGTTTTCCTCCTCCCCAACACTCACTTTCCCCTCTGGTCAGTAGTTTTCATGACAAGTTTCTCTCTTGCATTTCTTCATTTTATAATCGAAAAGGAACCCCCCAAAACAGAGCATCTGCCCGTGGTTGTCATGGCATTTGTGATGAGCGTGTTCTGGATATCTACTACAGCTGGAGAGCTGGTGAACTGCCTGGAAGCTATAGGCACACATCTCAAACTGCCGCCAGCACTCCTGGGTCTTACTGTACTGGCATGGGGAAATTCAGTAGGTGATCTTGTGGCCGATGTTGCAGTTGCTAAAGCCGGTCATCCGGCGATGGCGATGGCGGGATGTTTCGCCGGACCAATGTTCAACATGCTTGTTGGCCTTGGAAGTGCATTAGTCATACAGACGGCCAATATATATCCTAGAGCTTATCAGCTTAATTTCCACGTTGGTATAGTGATGGCATTTGTATTCCTGCTTTTAAGCCTTATGGGGTCTCTCTTAGTGATCACTTGGTGCAGATTCAGAGTGCCTAGGTTTTGGGGATTCTGTCTAGTAGGCATCTATGCTGCTTTTACGGCAGCAAGTTTAGGAATAGCCATGTTCTCAGGGTGA 1443 0.4906 MTSQSFLIIHITQIAVALHIMVHLCHPGVVHISLWDGIIPSKEHAKFWIHTSNKYRFIDQGSNLRSKEYNLTMHWHVMPKTGKMSADKIVMSALRAGQYRTGFGAILSAGTFVSALVVGFVAIFAAPFSVDPAPFVRDVLFYLTAAMFLFYVYLSAEIFLWQAVGFVAFYLFFVGFVFYMDLGMADRAQKSSADLERQLESDPDAVVSTSVEGEKRASGVRGAFRLISKTWELPVETVLRLTIPQPAPAQWSRFYASANIALCPLALLYACNSFMPFNHSIVFLLPNTHFPLWSVVFMTSFSLAFLHFIIEKEPPKTEHLPVVVMAFVMSVFWISTTAGELVNCLEAIGTHLKLPPALLGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGSALVIQTANIYPRAYQLNFHVGIVMAFVFLLLSLMGSLLVITWCRFRVPRFWGFCLVGIYAAFTAASLGIAMFSG 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00857 480 Pfam Sodium/calcium exchanger protein 91 178 IPR004837 GO:0016020|GO:0055085
Vian6g00857 480 Pfam Sodium/calcium exchanger protein 324 473 IPR004837 GO:0016020|GO:0055085
Vian6g00857 480 Gene3D - 256 473 IPR044880 -
Vian6g00857 480 Gene3D - 89 213 IPR044880 -
Vian6g00857 480 Pfam Signal peptidase subunit 31 89 IPR007653 GO:0005787|GO:0006465|GO:0016020
Vian6g00857 480 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 92 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00857 Vian-Chr6 25727879 25734659 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00857 91 479 Antiporters AT1G08960 71.392 0.0 546