Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00838 ATGATCGAGTCACTCTTTGGCTACAATTTACAGAATTCAACAAAGAACTACGAAACAATAAGTAAAACCCTCTCCCCTAAGGAGCATGTACTCGAGCCAAAACGGCTGCAAAATATAGCAATACTCTCTAAAGCTCTAAATATCACGGCAGAAGAAGTGTGTGAAGCTCTAATACTAGGGAAGGGTTTGTCTCTGCAACAACTGGAGGCACTGGTAAAAATGGTACCAACGAAAGAAGAAGAGGACAAGCTATTGAACTACAAAGGATCTATCAATGAACTTGGGTTCGCTGAAAATTTCGTGAGAGTAATGCTTAGCATACCATTTGCTTTTCCACGAGTGGAAGCCATGCTTTACAGAGAAACTTTCGAAGATGAAGTTACTCACATCAGCAACTCTTTCAAAATGCTAGAGGAAGCATGCAAGGAACTAAGGTCAAGCAAGTTCTTCTTGAAATTGCTGGAAGCAGTGCTGAAAACAGGAAACCGCATGAACGTGGGGACAACAAGGGGAGGTGCTAGAGCTTTCAAACTGGATGCCCTTCTCAAGCTTGCTGATGTTAAAGGAACAGATGGTAAAACCACCCTGCTCCATTTCTTTGTTCAGGAGATAGTTCGCTCAGAAGGGACCAAAGCTTCAAAGAACATCATGGGACAGAAGAGTGAAAAGAGAACGGAGGAAGAGGAGGAAGAAGATTATAGAAGAATGGGACTAAAACTTGTGTCTGGTCTTAGTGCTGAGTTATGCAATGTTAAAAAGACTGCGACAATTGACTTAAACGTGCTTGTAAGTTCTGTCTCGAACTTATCAAGTGGGTTGGCTAACATGCAGAAGCTAGTAAAAGGGTTGTTGTGTGAAGATGAAAAAAACAAGAGCTTTGTGATTTCTATGAAGTTGTTCCTGAATTATGCAGAAAGAAAGGTGCAAGAGTTGCATGGAGATGAAGCTAGAGTGATGGGTCGGGTAAAAGAAGTAACAGAGTATTTTCATGGGGATGTGAGTGACGAAGAGTCGAATCCACTTCAAATATTTGTAATAGTAAGAGACTTTCTGGGTATGGTAAATAATGTGTGCAATGAGCTTAAAAGGTCTATCAAATCCCCTCGCACTATTTGGATTTAG 1122 0.41 MIESLFGYNLQNSTKNYETISKTLSPKEHVLEPKRLQNIAILSKALNITAEEVCEALILGKGLSLQQLEALVKMVPTKEEEDKLLNYKGSINELGFAENFVRVMLSIPFAFPRVEAMLYRETFEDEVTHISNSFKMLEEACKELRSSKFFLKLLEAVLKTGNRMNVGTTRGGARAFKLDALLKLADVKGTDGKTTLLHFFVQEIVRSEGTKASKNIMGQKSEKRTEEEEEEDYRRMGLKLVSGLSAELCNVKKTATIDLNVLVSSVSNLSSGLANMQKLVKGLLCEDEKNKSFVISMKLFLNYAERKVQELHGDEARVMGRVKEVTEYFHGDVSDEESNPLQIFVIVRDFLGMVNNVCNELKRSIKSPRTIWI 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00838 373 Pfam Formin Homology 2 Domain 2 354 IPR015425 -
Vian6g00838 373 SUPERFAMILY Formin homology 2 domain (FH2 domain) 28 367 - -
Vian6g00838 373 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 373 IPR015425 -
Vian6g00838 373 PANTHER FORMIN-RELATED 1 365 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vian6g00838 373 Gene3D Formin, FH2 domain 1 369 IPR042201 -
Vian6g00838 373 SMART it6_source 2 369 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00838 Vian-Chr6 25490372 25491796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00838 1 370 FH2 protein (formin) Gene Family AT3G05470 68.000 2.68e-172 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00838 - - gmx:100805407 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00838 6 25490372 25491796 Vian6g00838 6 25490372 25491796 ECH