Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00805 ATGGGTTCTTGGGCTAGAGTATCTGTTTTGACTATTCCATGGTCTACAATCAATGCCGAATCTGCTACGGACTCCAAATTAGGCGCTGTGTTTTATAAAATGTACAGAAATCCAAATAATAGAAAACTGTGTGTCTCTTTTGCTTGGGATGATTATAAACTTAGGAGTCTTGGTGTGATTAAATCAGGCCAAGATATATCTTATTTTCAAACCGAACAAGAAGTAGGAACTTGGGAAGAACCAGATACTGGCAGTGACAGTGAGTCTGATAGTGAGGAAGTTGAAGACCACTTCCTATTTGAAAGTGACGGAATGAGGGCTTCAGTTGTTGCTGATGTTAATGTAACTTCAAGGGACAACTATGACGAACTTATTAAGAAAGAGGTTGAACAGCTTTTGGAACCAGAAGAAAGAGCAATATTGCAACAGAATGTTACTCCTAACTTGGAAAAAATATCAACTGAAAAATGGAGCCCACTGCACACTCTTGTGCTATCAATGCAGATGAGTTGCGTGGATAAGCTTCTTGATAACGGCATGGACATTGATTTGCCTGATAAGGAAGGCCTTACTGCACTTCATAAGGCAATTATAGGTAAAAAAGATACTTTGATTAGCCATCTTCTACGGAGACGAGCAAATCCGCATGTTAAGGATAAGGATGGAGCCACTCCACTTCATTATGCAGTTCAAGTTGGCGCCAAGATGACTGTGAAATTATTGATCAAGTACAAGGCTGATGTCAATGTTGAAGATAACGATGGTTGGACCCCCTTGCACGTTGCCATTCAGAGCAGAAATAGAGATATAGCAAAAATTTTGTTAGTCAATGGTGCTGATAAGACAAGGAAAAATAAGGACGGAAAAACAGCTCTGGATCTAAGCTTATGCTATGGGAAAGATTTTAAGTCTTATGAACTTGCCAAATTACTGAAGACGGTTCCAGCAGATAGCTGTCTATGA 963 0.3956 MGSWARVSVLTIPWSTINAESATDSKLGAVFYKMYRNPNNRKLCVSFAWDDYKLRSLGVIKSGQDISYFQTEQEVGTWEEPDTGSDSESDSEEVEDHFLFESDGMRASVVADVNVTSRDNYDELIKKEVEQLLEPEERAILQQNVTPNLEKISTEKWSPLHTLVLSMQMSCVDKLLDNGMDIDLPDKEGLTALHKAIIGKKDTLISHLLRRRANPHVKDKDGATPLHYAVQVGAKMTVKLLIKYKADVNVEDNDGWTPLHVAIQSRNRDIAKILLVNGADKTRKNKDGKTALDLSLCYGKDFKSYELAKLLKTVPADSCL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00805 320 MobiDBLite consensus disorder prediction 79 94 - -
Vian6g00805 320 Pfam Ankyrin repeats (many copies) 157 198 IPR002110 GO:0005515
Vian6g00805 320 ProSiteProfiles Ankyrin repeat profile. 188 220 IPR002110 GO:0005515
Vian6g00805 320 Gene3D - 119 222 IPR036770 -
Vian6g00805 320 Gene3D - 223 303 IPR036770 -
Vian6g00805 320 SMART ANK_2a 254 283 IPR002110 GO:0005515
Vian6g00805 320 SMART ANK_2a 155 184 IPR002110 GO:0005515
Vian6g00805 320 SMART ANK_2a 287 320 IPR002110 GO:0005515
Vian6g00805 320 SMART ANK_2a 221 250 IPR002110 GO:0005515
Vian6g00805 320 SMART ANK_2a 188 217 IPR002110 GO:0005515
Vian6g00805 320 ProSiteProfiles Ankyrin repeat profile. 254 286 IPR002110 GO:0005515
Vian6g00805 320 ProSiteProfiles Ankyrin repeat region circular profile. 221 253 - -
Vian6g00805 320 MobiDBLite consensus disorder prediction 72 94 - -
Vian6g00805 320 ProSiteProfiles Ankyrin repeat profile. 221 253 IPR002110 GO:0005515
Vian6g00805 320 SUPERFAMILY Ankyrin repeat 147 311 IPR036770 -
Vian6g00805 320 ProSiteProfiles Ankyrin repeat region circular profile. 254 280 - -
Vian6g00805 320 Pfam Ankyrin repeats (3 copies) 204 285 IPR002110 GO:0005515
Vian6g00805 320 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 128 312 - -
Vian6g00805 320 ProSiteProfiles Ankyrin repeat profile. 155 187 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00805 140 280 Ion Channels AT2G25600 30.496 1.08e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00805 - - gmx:100808064 513.072