Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00777 ATGTCAAACCGAGTTTGCATAAAAAGAGGGTTGTTGACACTAATGGGTGTGAAGTTTATGGGCAGACTGGAACACCCAACTCGTTTTTCCATGTGTGTTCGATCCAAAACAACGTCTGCTCAGTATGTAGCATCGAGATTTCGAGACCCCACGTTTGAGAAACTCATGGACAACTACAAGAACCTTGTTAAGGTCATTTCCATTCAAGACCTCATCCTTGCAAACCCAAAGAACCCATCAGTCTCCATTGATTTCCTCTCCAAGCTCTCCCAGAAGCTCCACTTAAACCGCGGGGCCACTGCCTTCCTCTGCAAGTTTCCTCACATCTTCCACATTTACTATGATCATTCCAAGTTGAAGCCCTTTTGCAGGTTAACTGACGCTGCTCTTGGTGTTACACGGCAGGAAGCGGTGGCCATCAATGCTTCTTTGCCTGTTGTTGTTGAAAGACTTGTCCGGATACTCTCCATGTCAGCATCCAGAATGGTGCCTCTTAGAGCTGTTTTTAAGGTTTGGAAGGAGCTTGGGCTGCCTGATGATTTCGAGGACTCTGTTATATCTGCTAATTCTGGTGTTTTTCAGCTGTGTGATGGGCATGAACAGAATACTCATTTGTTGAAGCTGGTTGATGGTGTTTCCAGCAATGGCATTAGGGCGGCTGTTGAGGATTGGAGGGTTGTTGAGTGCTGCAAGGAAGACTGCAGTGTTGATAGGATGGAAATGCAGTTTAGTTTCAAACACGGGTATCCTCCGGGGATGAGGTTGAGCAAGAATTTCAAGGCCAAGGTGAAGGAGTGGCAGAGGTTGCCTTATGTGGGGCCTTATGAAGTGCCAGGTGAGAAGAAGAAGTCTAAGGCTGGAATGATGGCTATGGAGAAGCGAGCAGTATCGATTGTTCACGAGTTCCTGAGTTTGACAGTAGAGAAGATGGTGGAAGTTGAGAAGATCAGCCAGTTTAGGAAATGGTTTGGGATTGATTTAAATATAAGGGATCTCTTCTTGGACCACCCAGGGATCTTCTATTTGTCAACTAAGGGTAAAAAACATACTGTTTTCCTGAGGGAAGCTTATGAACGAGGGTGTTTGATAGAACCAAATCCTGTCTATGATGCAAGAAGACGGCTACTTGATCTTGTTGTTCTAGAACGTCGGGGTCTGCCAGCTGTTAATTCGAAGTTGGAGGATTCAAGCAGCTGCGGTGAGGCTAGACAAGAGGAAAACCAGCAAAGACATTATTTGTCACCATCTTGA 1251 0.4564 MSNRVCIKRGLLTLMGVKFMGRLEHPTRFSMCVRSKTTSAQYVASRFRDPTFEKLMDNYKNLVKVISIQDLILANPKNPSVSIDFLSKLSQKLHLNRGATAFLCKFPHIFHIYYDHSKLKPFCRLTDAALGVTRQEAVAINASLPVVVERLVRILSMSASRMVPLRAVFKVWKELGLPDDFEDSVISANSGVFQLCDGHEQNTHLLKLVDGVSSNGIRAAVEDWRVVECCKEDCSVDRMEMQFSFKHGYPPGMRLSKNFKAKVKEWQRLPYVGPYEVPGEKKKSKAGMMAMEKRAVSIVHEFLSLTVEKMVEVEKISQFRKWFGIDLNIRDLFLDHPGIFYLSTKGKKHTVFLREAYERGCLIEPNPVYDARRRLLDLVVLERRGLPAVNSKLEDSSSCGEARQEENQQRHYLSPS 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00777 416 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 34 398 IPR045040 GO:0003723
Vian6g00777 416 MobiDBLite consensus disorder prediction 391 416 - -
Vian6g00777 416 Pfam Plant organelle RNA recognition domain 48 382 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00777 Vian-Chr6 24797463 24798713 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00777 - - gmx:100808404 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00777 6 24797463 24798713 Vian6g00777 6 24797463 24798713 ECH
Vian6g00777 6 24797463 24798713 Vian3g01423 3 15615555 15617171 PCT