Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00755 ATGCAGCTTCAATTTGATTCTCAGTTTCTTATGTCTATTCTGTTTCTTTCTTTTGTTGGCTTGTTATGTTATTTGTACACTTCTTTTGTGGACAAGCCAAATAGGCTTCGTTCTAAGCTAATGAAGCAAGGTATCAGTGGCCCACCTCCAACTATTCTGCTTGGCAATATTTTGGAGTTACAGAAAGCTCGCTCTGCCACTTCAAAGTCTTCTTCTTCTTCTTCAAAAGTCCCTTCCTCTCACAACTGTGCTGCTCTTCTCCTTCCACTCTTTGATAAATGGAGAAACGAATATGGTCAAGTGTTCATGTTTTCACTTGGAGCCATTCAAATAGTGTGTGTGAACCAACCAGACATAGTGAGAGAGGTCACTGTCTGCACATCCTTGGACTTGGCGAAGCCTGCATATCAACTGAAACACATAGGGCCTTTGGTGGGTCAAGGCATTTTAACTTCCAATGGGACTAAATGGGTTCATCAAAGAAAGATCATAGCTCCAGAACTATACATGGGAAAGGTTAAGGGAATGATGAATATAATTAGCGAGTCTGCTGTATCTGTGGTAAACTTGTGGAGTAATAGAGTAGAAGCAGAAGGTGGAGTTGCTGACATCAAAATTGATGAGTGCATGAGAAACTTCTCTGGTAATGTTATTTCAAGAGCATGCTTTGGAAGCAATTATACCAAGAGTGAAGAGATTTTCTTGAAACTCACAGCTCTCCAAGAGTTATTGTCCTGGAAAAATTTATTCAGACGTATCCCTGGCATGTGCTACCTTCCAACAAAGACCAATAGAGAAATATGGACATTAGAAAAGGAGGTGAATGAAATGATACTCCAGGTGGTGAAGGAAAGAAAGGAAACTACTTTTGAGAACGACTTGCTGCAAATGGTTCTTGAAAATGTTAAGGACAGTAAGCCAAGTAAAGAGGCCATTGACGATTTCATAGTTGATAACTGCAAGAATATATACTTGGCAGGCTATGAGACAACTGCAGTTTCTGCTACATGGTGCCTGATGCTGCTGGCCGCAAACCCAGATTGGCAAGATCGTGTTCGTGCTGAGGTGACAGAAATTTGCAGTGGTAGAATCCCAGATTTTAGTATGCTTGACAAAGAAATAGCTGCTATGCTTAGACTAGCTATGGTTATTCATGAAGTATTGCGGCTTTATCCTCCTGTGACTGTGGTGTCAAGAGAGGCCTTGAAGGACATGAAATTTGGGAACCTTGATGTTCCAAAGGGGTTTAACCTTTGGATAATGGTACTGCCACACGTGTACATGCCCTTTGGGGTTGGTCCACGAGTGTGTCTTGGACAGAACTTGGCTATTGTGGAACTTAAGATGATCATAGCTCTCATATTGTCCAAATTCACTTTCTCACTCTCTCCACGCTACGTTCATTCGCCCACTGTCAGGTTGCTCATAGAGCCTGAGCATGGAGTCAATATCTTGGTAAAAAAAATATGA 1470 0.4156 MQLQFDSQFLMSILFLSFVGLLCYLYTSFVDKPNRLRSKLMKQGISGPPPTILLGNILELQKARSATSKSSSSSSKVPSSHNCAALLLPLFDKWRNEYGQVFMFSLGAIQIVCVNQPDIVREVTVCTSLDLAKPAYQLKHIGPLVGQGILTSNGTKWVHQRKIIAPELYMGKVKGMMNIISESAVSVVNLWSNRVEAEGGVADIKIDECMRNFSGNVISRACFGSNYTKSEEIFLKLTALQELLSWKNLFRRIPGMCYLPTKTNREIWTLEKEVNEMILQVVKERKETTFENDLLQMVLENVKDSKPSKEAIDDFIVDNCKNIYLAGYETTAVSATWCLMLLAANPDWQDRVRAEVTEICSGRIPDFSMLDKEIAAMLRLAMVIHEVLRLYPPVTVVSREALKDMKFGNLDVPKGFNLWIMVLPHVYMPFGVGPRVCLGQNLAIVELKMIIALILSKFTFSLSPRYVHSPTVRLLIEPEHGVNILVKKI 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00755 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Vian6g00755 489 SUPERFAMILY Cytochrome P450 84 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00755 489 PANTHER CYTOCHROME P450 FAMILY MEMBER 425 481 - -
Vian6g00755 489 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00755 489 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00755 489 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00755 489 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00755 489 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00755 489 PRINTS E-class P450 group I signature 213 231 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00755 489 Gene3D Cytochrome P450 33 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00755 489 Pfam Cytochrome P450 424 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00755 489 Pfam Cytochrome P450 91 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00755 489 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00755 489 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00755 489 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00755 489 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00755 Vian-Chr6 24587073 24589455 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00755 119 486 Cytochrome P450 AT5G24900 38.200 1.03e-98 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00755 K24544 - gmx:100785420 742.651