Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00736 ATGGATCTTCTCTTCTTACCAAAAGTTCTTACCGCGCTTTTCTTTGCGACGGTGATTGCAGTGACGGCTGCAAAGCTTCGCGGGAAGCGGTTCAGGCTGCCACCGGGACCGTTTTCTGTACCGATATTTGGTAACTGGCTTCAGGTTGGCGATGACCTGAATCACCTTAACCTTGCCGACATTGCACGTTGCTTTGGCGACATATTTCTCCTCCGCATGGGGCAGCGGAATTTGGTGGTGGTCTCTTCGCCTGAGCTTGCGAAGGAGGTTCTCCACACGCAGGGCGTGGAGTTCGGCTCGCGCACGCGCAACGTCGTCTTCGACATCTTCACCGGGAAAGGCCAGGACATGGTGTTCACCGAGTACGGCGATCACTGGCGCAAGATGCGCCGCATAATGACGGTCCCGTTCTTCACCAACAAGGTCGTGCAGCAGTACCGCGTCGGGTGGGAGGACGAGGCGGCGCGTGTAGTGGAGGACATACGCCGCAGCCCCGACGCCGCGGCCGGAGGGATCGTTCTGCGGCGGAGACTGCAACTCATGATATATAACATCATGTATAGGATCATGTTCGATAGAAGGTTCGAGAACGAGGAGGACCCGTTGTTTCAGAAGCTTCGAGTTTTGAACGGTGAGAGGAGTCGTTTGGGGCAGAGCTTTGAGTACAACTACGGTGATTTTATCCCTGTTTTGCGGCCATTTTTGCGTGGGTACTTGAAGATTTGCAAGGAGGTTAAGGACACCAGGTTCAAACTCTTCAAGGATTATTTCATTGAGGAACGAAAGAATCTTGAAAATACCAAGAAAAGGGACAATGGAGGACTTAAATGCGCCATCGATCACATTTTGGACGCTCAGAGAAAAGGAGAGATTAGTGAGGATAATGTCCTTTACATTGTTGAGAACATTAACGTTGCTGATGCATTATTTTTAGTGAGAGTTTTGGAAGAAAAGTTTTCTGATGGACATAATGTTGAATTTGGAGCAGCAATTGAGACAACTCTGTGGTCAATTGAATGGGGCATTGCTGAGCTTGTGAACCACCCAGAGATCCAAAACAAGGTGAGGGAGGAGATTGAGAGAGTTGTAGGAGCAGGACACCAAGTGACAGAGCAAGACATTCATAAGCTCACTTACCTTCAGGCAGTGATAAAGGAAACTCTTCGGCTGAGAATGGCAATTCCACTCCTCGTCCCACACATGAACCTCCATGATGCTAAACTTGGAGGCTATGACATCCCTGCAGAGAGCAAGATCTTGGTGAATGCATGGTGGCTTGCCAACAACCCTGCTCAGTGGAAGAAGCCCGAGGAGTTCAGGCCTGAGAGGTTCTTGGAGGAAGAGTCGAAAGTAGAGGCGAATGGGAATGACTTCAGATACCTTCCCTTTGGTGTTGGGAGGAGGAGCTGCCCTGGAATTATCCTTGCATTGCCTATTATGGGCATTACTTTGGGGCGTTTGGTCCAAAATTTTGAGCTCTTGCCTCCCCCAGGACAAGACAAGCTTGATACCACTGAGAAAGGGGGCCAGTTTAGTCTGCACATACTCAAACACTCAACCATTGTCGCAAACCCAATATCATTTTAA 1587 0.4965 MDLLFLPKVLTALFFATVIAVTAAKLRGKRFRLPPGPFSVPIFGNWLQVGDDLNHLNLADIARCFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTEYGDHWRKMRRIMTVPFFTNKVVQQYRVGWEDEAARVVEDIRRSPDAAAGGIVLRRRLQLMIYNIMYRIMFDRRFENEEDPLFQKLRVLNGERSRLGQSFEYNYGDFIPVLRPFLRGYLKICKEVKDTRFKLFKDYFIEERKNLENTKKRDNGGLKCAIDHILDAQRKGEISEDNVLYIVENINVADALFLVRVLEEKFSDGHNVEFGAAIETTLWSIEWGIAELVNHPEIQNKVREEIERVVGAGHQVTEQDIHKLTYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPAQWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPIMGITLGRLVQNFELLPPPGQDKLDTTEKGGQFSLHILKHSTIVANPISF 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00736 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Vian6g00736 528 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00736 528 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00736 528 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00736 528 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00736 528 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00736 528 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00736 528 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00736 528 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00736 528 Gene3D Cytochrome P450 20 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00736 528 SUPERFAMILY Cytochrome P450 34 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00736 528 CDD CYP73 65 519 - -
Vian6g00736 528 Pfam Cytochrome P450 327 518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00736 528 Pfam Cytochrome P450 34 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00736 528 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00736 528 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00736 528 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00736 528 FunFam Putative cytochrome P450 superfamily protein 26 300 - -
Vian6g00736 528 FunFam Putative cytochrome P450 superfamily protein 446 517 - -
Vian6g00736 528 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 2 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00736 Vian-Chr6 24293488 24296169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00736 1 525 Monolignol Biosynthesis Gene Families AT2G30490 75.810 0.0 811