Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00735 ATGGCAGATTCCAATGTGGTTCTACTGGATTTCTGGCCAAGCTCTTACGGAATGAGAGTGAAAATCGCTTTGGCAGAGAAGGGTATCTCGTATGAGTGCAAGCAAGAAGATTTAGAAGCTAAAAGCTCTCTGCTTCTAGAGATGAACCCAGTTCACAAAATGATACCAGTTTTGATTCATAATGCAAAACCCATCTGTGAGTCACTCAATATTGTTCAGTACATTGACGAGGCATGGAAACACAAATCTTCTCTGCTTCCCTCTGACCCTTACAAGCGATCCCAAGCCAGGTTTTGGGGCGATTACATTGACAAAAATGTATACAATGCTGTGAAGAGGGTATGGTCGGGGAAGGGTAAAGAGCAAGAAGAGTGGAAGAAAGAACTGATAGAATGTTTGAAGAGGCTGGAAGATGAACTTGGAGACAAGGCATATTTTGGTGGTGAAGAGTTTGGGTATGTGGATGTGGCTCTTGTTCCTTTCACTAGCTGGTTTTACACGGTTGAGACGTTTGGGAAACTAAGCATTGAAGATGAGTGTCCAACACTTGTGGCTTGGGCCAAAAGGTGCATGCAGAAAGAGACTGTGGCCTCATCACTCCCTCACCCTGAACAGATCTATGCTTTTGCCCTGCAATATAAACACAGACATGGACTTCAGTAG 663 0.4404 MADSNVVLLDFWPSSYGMRVKIALAEKGISYECKQEDLEAKSSLLLEMNPVHKMIPVLIHNAKPICESLNIVQYIDEAWKHKSSLLPSDPYKRSQARFWGDYIDKNVYNAVKRVWSGKGKEQEEWKKELIECLKRLEDELGDKAYFGGEEFGYVDVALVPFTSWFYTVETFGKLSIEDECPTLVAWAKRCMQKETVASSLPHPEQIYAFALQYKHRHGLQ 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00735 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Vian6g00735 220 FunFam Tau class glutathione S-transferase 1 88 - -
Vian6g00735 220 Gene3D Glutaredoxin 1 88 - -
Vian6g00735 220 CDD GST_C_Tau 90 213 IPR045074 GO:0004364|GO:0006749
Vian6g00735 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 207 IPR045073 -
Vian6g00735 220 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
Vian6g00735 220 SFLD Glutathione Transferase (cytosolic) 2 216 IPR040079 -
Vian6g00735 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 209 IPR010987 -
Vian6g00735 220 FunFam Glutathione S-transferase U20 89 220 - -
Vian6g00735 220 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Vian6g00735 220 Gene3D - 89 220 - -
Vian6g00735 220 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Vian6g00735 220 CDD GST_N_Tau 6 79 - -
Vian6g00735 220 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Vian6g00735 220 Pfam Glutathione S-transferase, C-terminal domain 118 193 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00735 Vian-Chr6 24290255 24291266 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00735 7 217 Glutathione S-transferase Gene Family AT1G78370 58.294 1.62e-97 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00735 K00799 - gmx:100527221 395.586