Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00734 ATGAAAGACACAATTCAAACTCCAATCACACTCACCGGCTTGCTCCGCCACGTGGCTGCCAAATTCCCCTCCCGTCGAGCCATCTCTGTCGCCGGCAAATACGACATCACCCACTCCCGCCTCCACCACCTCACAGAATCCACCGCCGCTCGATTGGTCGCTGCCGGCATCAAACCGGGCGACGTCGTCGCCCTCGTCTTCCCTAACACCGTCGAGTTTGTTGTCATGTTTTTAGCCGTCATTCGAGCGCGAGCCACAGCCGCGCCGTTAAACCCAGCTTACACGGCCGATGAGTTTGAGTTTTACTTATCCGACTCAGATTCAAAGCTTCTGGTCACATCACTGGAAGGAAACACGCCGGCTCAAGCTGCAGCTTCGAAACTCAATATCGCTCACGCCGCAGCTTCTTTGACCCAAAGCGAAAACGAAGAAGCCGAGCTTAGTCTCTCGTTGAGCCACTCTTTTGACTCGGTTGAGTCACTCGTTAACGATCCTGCTGACGTGGCGCTTTTCCTTCACACCTCCGGAACCACGAGCCGTCCCAAGGGGGTGCCGCTGACCCAGCACAACTTGCTCTCTTCCGTGAGGAACATTGACTCGGTGTATCGACTCACTGAGTCTGACTCGACGGTGATTGTGCTTCCGCTGTTCCATGTGCATGGGTTGATCGCCGGGCTGCTGAGTTCTCTCGGCGCCGGCGCGGCTGTGGCGTTGCCGGCGGCAGGGAGGTTCTCCGCTTCAGCATTCTGGAAGGACATGGTTAAGTACAACGCCACGTGGTACACTGCGGTTCCTACCATACACCAGATCATACTGGATCGCCACTTTAACAATCCCGAACCAGTTTACCCGAGGCTCCGGTTCATCCGGAGCTGCAGCGCGTCTCTTGCACCGGCTATCATGGGTAAACTGGAGGAGGCTTTCAGTGCCCCCGTCTTGGAGGCTTATGCAATGACGGAAGCCTCGCATCTCATGGCTTCGAACCCTTTACCCCAAGATGGGCCCCACAAGGCCGGGTCGGTTGGGAAGCCCGTAGGCCAAGAAATGGGTATACTGGATGAATCGGGTCGGGTCCAGGAGGCTGGAGTTAGTGGAGAGGTTTGCATTCGCGGACCCAATGTAACGAACGGATATAAAAACAACGTGGAAGCTAACACGGCGGCGTTTCAGTTCGGTTGGTTTCACACCGGTGATATTGGATACTTTGATTCTGATGGGTATTTGCACCTAGTGGGTCGGATCAAGGAACTCATCAACCGCGGAGGTGAAAAGATATCACCAATAGAAGTTGATGCTGTCCTTCTTTCACACCAGGACATTGCTCAAGCAGTTGCTTTCGGAGTGCCTGATCCAAAGTATGGGGAGGAGATATATTGTGCTGTGATCCCAAGAGAAGGATCAAACATGGATGAGGCAGAGTTGCTAAGATACGGCAAGAAGAATCTTGCATCCTTCAAAGTCCCCAAAAAGGTTTTCTTCACTGATGCTTTGCCCAAGACTGCCACAGGAAAGATTTTGCGCCGACTTGTGGCAGAACATTTCGTCTCTCAAATTTGA 1557 0.535 MKDTIQTPITLTGLLRHVAAKFPSRRAISVAGKYDITHSRLHHLTESTAARLVAAGIKPGDVVALVFPNTVEFVVMFLAVIRARATAAPLNPAYTADEFEFYLSDSDSKLLVTSLEGNTPAQAAASKLNIAHAAASLTQSENEEAELSLSLSHSFDSVESLVNDPADVALFLHTSGTTSRPKGVPLTQHNLLSSVRNIDSVYRLTESDSTVIVLPLFHVHGLIAGLLSSLGAGAAVALPAAGRFSASAFWKDMVKYNATWYTAVPTIHQIILDRHFNNPEPVYPRLRFIRSCSASLAPAIMGKLEEAFSAPVLEAYAMTEASHLMASNPLPQDGPHKAGSVGKPVGQEMGILDESGRVQEAGVSGEVCIRGPNVTNGYKNNVEANTAAFQFGWFHTGDIGYFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHQDIAQAVAFGVPDPKYGEEIYCAVIPREGSNMDEAELLRYGKKNLASFKVPKKVFFTDALPKTATGKILRRLVAEHFVSQI 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00734 518 FunFam Peroxisomal-coenzyme A synthetase 10 413 - -
Vian6g00734 518 FunFam 4-coumarate--CoA ligase 2 416 517 - -
Vian6g00734 518 PANTHER ACYL-COA SYNTHETASE 10 515 - -
Vian6g00734 518 Gene3D - 414 516 IPR045851 -
Vian6g00734 518 Pfam AMP-binding enzyme 16 420 IPR000873 -
Vian6g00734 518 SUPERFAMILY Acetyl-CoA synthetase-like 8 516 - -
Vian6g00734 518 ProSitePatterns Putative AMP-binding domain signature. 171 182 IPR020845 -
Vian6g00734 518 Gene3D - 9 413 IPR042099 -
Vian6g00734 518 CDD FACL_fum10p_like 23 512 IPR045310 GO:0016874
Vian6g00734 518 Pfam AMP-binding enzyme C-terminal domain 429 504 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00734 Vian-Chr6 24284581 24287179 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00734 10 518 Monolignol Biosynthesis Gene Families AT4G05160 30.418 5.55e-59 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00734 K22133 - gmx:100779306 869.381