Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00731 ATGATTCAGAAGCCTAAACTGCCTCCAGGTCCTAAACCATGGCCTATACTTGGTAACCTTCCTCAAATGCTTTCAAACAAACCTGTTTTTCAATGGATACACAATCTCATGCAAGATATGAACACTCAAATTGCATGCATTCGTCTAGGAAATGTCCATGTAATTCCAGTCACATGTCCCTCCATTGCTTGTGAGTTTTTGAGAAAGCACGATGCTGAATTTTCTTCAAGACCACTGACCATGGCCACTGATATCATGTCCAGTGGTTATAAGACCATAGCTATTGTACCCTTTGGGGAGCAATGGAAGAAAATGAGGAGAATCTTCGTCAACGACTTGTTCTCCCCTCTCAGACACCACTGCTTTCAACACAAAAGGAACGAAGAAGCTGATAACATTATGTTTTATGTGTACAACAAATGCAACAATGTGAAGGATGGGGGCCTTGTGAACGTCAGAGATGTTTCACAGCACTATTGCTGCAATGTGACGAGGAAGTTGATTTTTAATACAAGGTACTTTGGAAAGGGTAGGGTGGATGGAGGGCCAGGGCCAGAAGAAGTAGAACAAGTGAATAATATTTTCACATTGCTTAAACACGTTTATGCATTTTCTGCTTCTGATTATCTTCCATTGTTGAGGGTTTTTGATTTGGATGGGCACAAGAGGAAGGTGAAGAAAGCAATGAGAACGATGGAGAAGTATCATGATCCAATGATTGAAGAGAGAATGAAGCAATGGAAGAATGGAGCAAAGAACGTTGAAGAAGACTTGTTGGATGTTCTGATCTCACTCAAAGATGACAATGACAATCGTACTCTCACAATGAAGGAAATCAAGGCCCTTACTATAGAACTTATGCTTGGAGGAGCAGACAATCCATCCAATGCAGTTGAATGTGCACTTGTAGAAATGATAAATCAGCCGGATATACTTCAGCAAGCTACTGATGAAGTAGACAAGGTTGTCGAACCAGATTTGACGTTCATATCATTTGGCACAGGAAGACGAGGTTGTCCTGCAATCTTACTTGGCTCCACCATGACTGTGATGTTGTTGGCAAGGTTGATTCATGCCTTTTCTTGGAGTGCACCTCCAAATGTATCAAGTATCAAGATTGTTAAGTCTGCTAATGGTGGTATGCTTGCTGAGCCACTTGTGTTAGAAGCCAAACCCAGATTAGCACCAGAGTTGTATTACATATAA 1206 0.4129 MIQKPKLPPGPKPWPILGNLPQMLSNKPVFQWIHNLMQDMNTQIACIRLGNVHVIPVTCPSIACEFLRKHDAEFSSRPLTMATDIMSSGYKTIAIVPFGEQWKKMRRIFVNDLFSPLRHHCFQHKRNEEADNIMFYVYNKCNNVKDGGLVNVRDVSQHYCCNVTRKLIFNTRYFGKGRVDGGPGPEEVEQVNNIFTLLKHVYAFSASDYLPLLRVFDLDGHKRKVKKAMRTMEKYHDPMIEERMKQWKNGAKNVEEDLLDVLISLKDDNDNRTLTMKEIKALTIELMLGGADNPSNAVECALVEMINQPDILQQATDEVDKVVEPDLTFISFGTGRRGCPAILLGSTMTVMLLARLIHAFSWSAPPNVSSIKIVKSANGGMLAEPLVLEAKPRLAPELYYI 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00731 401 ProSitePatterns EF-hand calcium-binding domain. 267 279 IPR018247 -
Vian6g00731 401 PRINTS E-class P450 group I signature 159 177 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00731 401 PRINTS E-class P450 group I signature 278 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00731 401 PRINTS E-class P450 group I signature 62 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00731 401 PRINTS E-class P450 group I signature 298 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00731 401 SUPERFAMILY Cytochrome P450 4 393 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00731 401 Pfam Cytochrome P450 8 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00731 401 Gene3D Cytochrome P450 325 396 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00731 401 Gene3D Cytochrome P450 2 324 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00731 401 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 332 341 IPR017972 GO:0005506|GO:0016705
Vian6g00731 401 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 326 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00731 Vian-Chr6 24243386 24245793 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00731 324 399 Cytochrome P450 AT5G05260 51.316 1.25e-16 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00731 - K14984 vra:106774791 619.387