Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00727 ATGGCTCAAACCCCATTTCTTCTGTTGTCAAATTTTCAAAGCTTTTGGCCTTCTTTGGTTGTCATAATCACCTGCTTCACCATTATGATCAAAACCCTAAGGTCTAACTATATCCAGACTTATTCCAAGAAACAAAAGCCGAAGCTCCCTCCTGGACCCAAACCATGGCCCATTGTAGGCAATCTTCCTGAAATGCTTGCAAGCAAACCTGCTTATAAATGGATACATAATCTCATGAAACAAATGAACACTGATATTGCATGTATCCGCTTAGGAAATGCCTATGTCATCCCAGTCACATGTCCCACCATTGCTACCGAGTTCTTGAGAAAACAAGATGCTACTTTTGCATCAAGATCACTCAGCCTGTCCAGTGATCTCATTTCTAATGGATATTCAACAACAATTTTTGTGCCCTTCGGTGACCAGTGGAAGAAAATGAGGAAAATCATAACCCACGATTTGCTTTCTCCACACAAACACCTATGGCTTCACGACAAAAGGACTGAAGAGGCCGACAACCTTATGTTTTACGTCTACGACAAGTGCAAAATGGTGAATGATGATGGTACTTATGGCCTTGTGAATGTTAGGAATGTTGCAAGGCATTATTGTGGCAACCTCATCAGAAAAATTACTTTCAATGTAAGGTATTTTGGGGAGGGTAGAGAGGACGGAGGAGCCGGTTTTGAAGAAGTAGAACATGTTGATTCCATCTTCGATTTGCTCAACTACATTTATTCCTTTTCTGTTTCTGATTATATGCCATGCTTGAGGGGACTTGATTTGGATGGCCATCAGAAGAAAGTGAGGGAAGCTTTGAGGATCATCAAGAAGTATCATGATCCCATCATTCAACAGAGAATCAAACAATGGAATGATGGATTAAAGGTTGATGAAGAGGACTGGCTTGATGTTCTCATCTCTCTGAAAGATTCCAACAATAACCCATCGTTAACATTTGAACAGATCAGTGCACAAATCATAGAATTGATGATTGCAACAGTGGACAATCCATCCAATGCATTTGAATGGGCACTTGCTGAGATGATTAACCAACCTGAGATACTGCGCCGAGCTGTCGAAGAATTGGACAGTGTGGTAGGAAAAGACAGGCTGATCCAAGAATCAGACATACCTAAGCTCAACTATGTGAAGGCATGTGCCAAAGAAGCTTTTCGTCTTCATCCCATGGCTCCTTTCATTCCTCCCCATGTCTCTATGAGTGACACTGTTGTGGGGAATTACTTCATCCCTAAGGGTAGCCACGTATTGCTAAGCAGACAAGAACTTGGAAGAAACCCAAAAGTGTGGAATGAACCCTACAAGTTCAAACCTGAACGCCACCTCAAGAGTGATGCAGATGATGTGGTTTTGACTGAACCAAATCTGAAGTTCATATCATTCAGCACAGGAAGACGAGGTTGTCCCGGAGTGATGTTAGGAACGACAATGACAGTGATGCTGTTTGCTAGATTGCTCCATGGCTTCACTTGGACTGCACCACCCGATGTTTCAACAATCAACCTTTCTGAGTCAGACGATGATATTCTTCTTGCACAACCACTTCTTGCCATTGCTCAGCCAAGATTACCACAAAAGCTATATCAACTCTAA 1617 0.4218 MAQTPFLLLSNFQSFWPSLVVIITCFTIMIKTLRSNYIQTYSKKQKPKLPPGPKPWPIVGNLPEMLASKPAYKWIHNLMKQMNTDIACIRLGNAYVIPVTCPTIATEFLRKQDATFASRSLSLSSDLISNGYSTTIFVPFGDQWKKMRKIITHDLLSPHKHLWLHDKRTEEADNLMFYVYDKCKMVNDDGTYGLVNVRNVARHYCGNLIRKITFNVRYFGEGREDGGAGFEEVEHVDSIFDLLNYIYSFSVSDYMPCLRGLDLDGHQKKVREALRIIKKYHDPIIQQRIKQWNDGLKVDEEDWLDVLISLKDSNNNPSLTFEQISAQIIELMIATVDNPSNAFEWALAEMINQPEILRRAVEELDSVVGKDRLIQESDIPKLNYVKACAKEAFRLHPMAPFIPPHVSMSDTVVGNYFIPKGSHVLLSRQELGRNPKVWNEPYKFKPERHLKSDADDVVLTEPNLKFISFSTGRRGCPGVMLGTTMTVMLFARLLHGFTWTAPPDVSTINLSESDDDILLAQPLLAIAQPRLPQKLYQL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00727 538 Gene3D Cytochrome P450 41 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00727 538 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Vian6g00727 538 SUPERFAMILY Cytochrome P450 50 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00727 538 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00727 538 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00727 538 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00727 538 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00727 538 PRINTS E-class P450 group I signature 427 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00727 538 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00727 538 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00727 538 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00727 538 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 21 537 - -
Vian6g00727 538 CDD CYP79 84 531 - -
Vian6g00727 538 Pfam Cytochrome P450 50 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00727 538 FunFam Cytochrome P450 9 42 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00727 Vian-Chr6 24196227 24198116 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00727 8 536 Cytochrome P450 AT4G39950 53.396 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00727 - K14984 gmx:100809902 929.472