Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00719 ATGGCCACACAGACGCAAGATTCACCTTCAAACCCTAACCCTAATCCCAATGCCACGTCACCGACGCCGTCTTCTTCGTTGTTCTTTCGCGGCGCCGGTGCTTCCGCAGCTCCCTTCGCCGGCTCCGGCGAGTCCCACTCGCACCACCGGAGAGCACTCTCGGAGGTCAGTTACCGGCTTCCGGACGACATGATGGACCTCTCGCCGTCGGATCCGTTCAACGGCGGATCCTCGACGGCGAGCCTAGAGGAGATCGGATCCGAGGACGACCTCTTCTCTACCTACATTGACGTTGAAAAGCTCGGCAGTGGCGCTAACGGCGCCGGCCGCGGTGGAAATGGATCGGATCAGAGCGGTTACGGAAACGGCGCCGGTATTAGCGAACACAACGACGGCGAGAAGAGTCCGAGAGCTGCAGAGGCGCGGCCGAGACACCGGCACAGTAGCTCCGTCGACGGTTCCTCGTCGACAAGCATGTTCGGAGAGATCATGGAAGCGAAGAAAGCAATGCCTCCTGATAAGCTAGCGGAACTTTGGAACATTGATCCAAAGCGTGCCAAGAGAATACTAGCTAATCGGCAATCTGCTGCGCGTTCAAAAGAAAGAAAGGCGCGCTATATACAAGAACTAGAGCGCAAAGTTCAGACCCTCCAAACCGAGGCAACAACACTTTCTGCCCAACTCACACTGTACCAGAGGGATACAACTGGTCTGAGTAGTGAAAATACCGAGCTTAAGCTCCGTCTCCAAGCCATGGAGCAACAGGCACAACTTCGTGATGCTCTTAATGATGCATTGATGAAGGAAGTTGAGAGGCTTAAGATTGCTACTGGCGAGGTATTGAACAACCACTCTGAGTCTTTCAATATGGGAATGCACCAGATGCCATTTGCAGGGTCAAATTTCTTTTCAATCCCACCACATTCAGGTCCTCCTAGTCACCAGAATATGCAGTTGCCTCCATATGGTCTCTCCCAATCTAGCATGCCAGCTCATCAGCTGCAACAAACAAATTCTCACCAAATCTCAGATATATTGCAAAACGACCAGCTTGGTCGTTTGCAGGGACTTGACATTAGTAGCAAAGGATCACCATTTGTGAAATCTGAAGGCCCTTCAATATCCGCAAATGATAGTAGTACTACGTTTTGA 1152 0.52 MATQTQDSPSNPNPNPNATSPTPSSSLFFRGAGASAAPFAGSGESHSHHRRALSEVSYRLPDDMMDLSPSDPFNGGSSTASLEEIGSEDDLFSTYIDVEKLGSGANGAGRGGNGSDQSGYGNGAGISEHNDGEKSPRAAEARPRHRHSSSVDGSSSTSMFGEIMEAKKAMPPDKLAELWNIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSSENTELKLRLQAMEQQAQLRDALNDALMKEVERLKIATGEVLNNHSESFNMGMHQMPFAGSNFFSIPPHSGPPSHQNMQLPPYGLSQSSMPAHQLQQTNSHQISDILQNDQLGRLQGLDISSKGSPFVKSEGPSISANDSSTTF 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00719 383 MobiDBLite consensus disorder prediction 130 149 - -
Vian6g00719 383 MobiDBLite consensus disorder prediction 1 86 - -
Vian6g00719 383 CDD bZIP_plant_RF2 185 234 IPR044759 GO:0003700|GO:0006355
Vian6g00719 383 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 182 245 IPR004827 GO:0003700|GO:0006355
Vian6g00719 383 Gene3D - 183 236 - -
Vian6g00719 383 MobiDBLite consensus disorder prediction 110 124 - -
Vian6g00719 383 MobiDBLite consensus disorder prediction 306 338 - -
Vian6g00719 383 MobiDBLite consensus disorder prediction 366 383 - -
Vian6g00719 383 Pfam bZIP transcription factor 184 242 IPR004827 GO:0003700|GO:0006355
Vian6g00719 383 SMART brlzneu 180 244 IPR004827 GO:0003700|GO:0006355
Vian6g00719 383 MobiDBLite consensus disorder prediction 101 158 - -
Vian6g00719 383 Coils Coil 200 227 - -
Vian6g00719 383 MobiDBLite consensus disorder prediction 305 338 - -
Vian6g00719 383 FunFam probable transcription factor PosF21 183 236 - -
Vian6g00719 383 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 6 368 - -
Vian6g00719 383 MobiDBLite consensus disorder prediction 362 383 - -
Vian6g00719 383 SUPERFAMILY Leucine zipper domain 184 235 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00719 Vian-Chr6 24062091 24064926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00719 7 383 bZIP Transcription Factor Family AT2G40620 51.589 1.75e-101 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vian6g00719 bZIP_1 3.1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00719 - - gmx:100775607 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00719 6 24062091 24064926 Vian6g00719 6 24062091 24064926 ECH