Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00710 ATGAATGAAATTAGCACCCTTTGTGGGATTGAGGCATGTGCCATAATCTATTCTCCAAATGATCCTCAGCCAGAGGTTTGGCCATCTGAGCCAGAAGTACAAAGGGTGCTTTCCAAGTTCATGGAAATGTCTGAGCAGAAACAATGCAGAAAGATGTTGAATCAGGAGAGCTTGTTGAAGCAAATAATCATCAAAGGCCAACAGCAGTTGACAAGACAAAGGAATGACAACAGGAAGAAAGAAATGACTCATCTCATGTTTCAGTACTTGAATGTTGGGAGGGTTTATGACAATCCTAGTTTGATAGATTTGAATGATCTCTCATGGCTGATTGATCAGAACCTGAATGAAATAAAAAAGAAGATGACTATGATCCAAATCCAAGAAGGGGCCCCAGTGACTGAAAATGGAGGAGAACGTGGACACATGCATCATGCTCAAGGGCCAGAGAACAGGACAGACACCATTCAGAACCAATATTGA 483 0.4161 MNEISTLCGIEACAIIYSPNDPQPEVWPSEPEVQRVLSKFMEMSEQKQCRKMLNQESLLKQIIIKGQQQLTRQRNDNRKKEMTHLMFQYLNVGRVYDNPSLIDLNDLSWLIDQNLNEIKKKMTMIQIQEGAPVTENGGERGHMHHAQGPENRTDTIQNQY 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00710 160 CDD MADS_SRF_like 1 54 IPR033897 GO:0000981|GO:0000987|GO:0045944
Vian6g00710 160 Gene3D - 1 63 IPR036879 GO:0003677|GO:0046983
Vian6g00710 160 MobiDBLite consensus disorder prediction 131 160 - -
Vian6g00710 160 SUPERFAMILY SRF-like 2 63 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00710 Vian-Chr6 23936036 23936518 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00710 1 126 Type I MADS-box Gene Family AT5G48670 47.619 4.68e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00710 - - vra:106752446 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00710 6 23936036 23936518 Vian6g00710 6 23936036 23936518 ECH