Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00707 ATGTATTCCAATAAAGGGTATAGAGATGATCGCAAAGCTGAGCCTCGTTACATTGAAACCGACCCAAATGGTAGATATGCTCGGGTTGGAGATATTTTAGGAAAAGGGGCAATGAAGACAGTGTATAAAGCAATTGATGAGGTTCTTGGAACAGAGGTTGCATGGAGTCAGGTCAAACTGAATGATGCATTTCGAAAACCAGAGGACTTGGAGAGGCTTTATTTAGAGGTTCATCTCCTCAGCACCCTCAAGCACCAATCCATCATGAGATTCTACACCTCTTGGATTGATGTCAACAATAAGACCTTCAACTTCATCACAGAAATGTTTACTTCAGGGACTCTAAGAGAATACCGGAAGAAATATAAGCACATAGGTCTGAGAGCAATAAAGAGTTGGGCTCGGCAAATCTTACAGGGTCTTGTTTATCTGCATGAACATGATCCTCCAGTAATTCATAGGGACCTCAAATGTGACAATATATTTGTCAATGGCCATCTTGGACAAGTGAAAATTGGTGACCTGGGTCTAGCAGCAATTCTCCATGGTTCCCAACCAGCTCACAGTGTTATAGGCACTCCCGAGTTCATGGCACCAGAATTGTATGAGGAAGAATACAATGAACTAGTTGATGTGTACTCATTTGGCATGTGTGTTTTGGAAATGCTTACATCTGATTATCCATACAGTGAATGTACTAACCCTGCACAGATATACAAAAAAGTAACATCAGGGAAGCTACCAGCAGCGTTTTTCAGGATTGAAGACACAGAAGCACAAAAGTTTATTGGCAAATGTCTAATAGCTGCAGCAGAGAGACCATCTGCAAAAGAATTGTTGCATGATCCATTTCTTTTGTCTAATGATGAATCATCCATGGCAAAGATTAGAATTCAGAAGCCGTTTCTAAATTACAGCGAAATGGAAAAACTTCAACTGAGTGATGATTTACCAATGACTAAAATGTCAATAACTGGGAAGCTGAATTCACAAGATGACACTATCTTTCTCAAAGTGAAAATTTCTGAGAAGGATGGTTCCTGTAGGAATGTATACTTTCCCTTTGACATTTACACAGACACCCCTGTTGATGTTGCAATAGAGATGGTGAAAGAGTTGGAAATCACAGATTTGGAGCCATCTGATATTGCACGTATGATTGAAGGAGAGATATCTGTGCTGCTGCCGAAATGGAGGAATAGTAACTGTCCAGAGAGCTGCCATACATACAGTTATAATGATGACAAGGACAATGAAGATCCTCAGCATCATTTCCACTCTATTTCTTCTTGCTCATCATCCCTAGAATCAATACTAGGCTCAGTCAACAGAGTGGATGACTTATTGAATGGATATCATTGGCTCAATGGTGATATAGTTGATGATGGAAGTTCAATATGCTCTTCACATGGGATATGTTCGAACTCAAACAACATGTGTTCAATGGATGAGGAGGAGGAACATCATAAGGGTTCTAGAAGAAAAGATAAAGACCTCATCATAAAGAGTCACATGTGTACTAGATTTTACCCTAATGAAGACCACAAAATTCTGGCAGGACCACAAACACCTTCTACTGGCAAAAGTAACAGGATGATAGACAATCGCAGACTAACTAGGAACAAGTCATTAATTGATACGAGAAGCCAGCTACTGCACAGATCACTGGTTGAAGAGATAAACAAAAGAAGATTCAAGACAGTTGGAGCTGTGGAAAATATTGGATTTGTGACACCTTATCAGGTTACAAACAAAATTTCAAATCCAGCATGTGCTGCTTTCGATGTGAACTCTTCAAGTACGAAGGGAAAAAACTTGAGAGAAAAAAAAATTTGA 1836 0.3954 MYSNKGYRDDRKAEPRYIETDPNGRYARVGDILGKGAMKTVYKAIDEVLGTEVAWSQVKLNDAFRKPEDLERLYLEVHLLSTLKHQSIMRFYTSWIDVNNKTFNFITEMFTSGTLREYRKKYKHIGLRAIKSWARQILQGLVYLHEHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILHGSQPAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMLTSDYPYSECTNPAQIYKKVTSGKLPAAFFRIEDTEAQKFIGKCLIAAAERPSAKELLHDPFLLSNDESSMAKIRIQKPFLNYSEMEKLQLSDDLPMTKMSITGKLNSQDDTIFLKVKISEKDGSCRNVYFPFDIYTDTPVDVAIEMVKELEITDLEPSDIARMIEGEISVLLPKWRNSNCPESCHTYSYNDDKDNEDPQHHFHSISSCSSSLESILGSVNRVDDLLNGYHWLNGDIVDDGSSICSSHGICSNSNNMCSMDEEEEHHKGSRRKDKDLIIKSHMCTRFYPNEDHKILAGPQTPSTGKSNRMIDNRRLTRNKSLIDTRSQLLHRSLVEEINKRRFKTVGAVENIGFVTPYQVTNKISNPACAAFDVNSSSTKGKNLREKKI 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00707 611 Gene3D Transferase(Phosphotransferase) domain 1 110 292 - -
Vian6g00707 611 FunFam Probable serine/threonine-protein kinase WNK1 11 108 - -
Vian6g00707 611 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
Vian6g00707 611 SUPERFAMILY Protein kinase-like (PK-like) 29 320 IPR011009 -
Vian6g00707 611 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian6g00707 611 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 478 - -
Vian6g00707 611 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Vian6g00707 611 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian6g00707 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Vian6g00707 611 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00707 Vian-Chr6 23896513 23901196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00707 17 585 MAP Kinase Kinase Kinase AT5G58350 57.069 0.0 618
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Vian6g00707 Pkinase 4.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00707 K08867 - gmx:100778102 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00707 6 23896513 23901196 Vian6g00707 6 23896513 23901196 ECH