Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00706 ATGGGTAATAACAGGTTCAGATTGTCTGATATGATGCCAAATGCATGGTTCTATAAGCTCAAAGATATGAGCAAATCAAGGAAGAAAAATGGCCCTCATGTTATGAAGAACAAAGTTACCTCACCAACAACCTCCCAAAGGTCACAACCAAGATACTCTCACTGTTTCTCCATTGAACCGAACATAGCTGGTAAGTTATACAACTCTCCTATTTACACTAAGCACTCAGACAACATATTCATTGATTCACCAAGAAGATCATCTAAAAGAAGAACCAAGAGAAAAACCATTTATAAGCCTTCTCCCACAGTTGTCTCTTCACCAGTCATAGAAAGTTTTAGTTCTCATTCCACAAATTGGATTAAGCCAAATCCACCTCACTCTTCTGACTATTATCTCTCCTCCTCCCAGAGTTCTTATGAATCAAACTTCCATGAATATGTTTCATCTGAGTCTGAGTGTGACAAGTTCACTATTCCTGGCCTGCTTAATGGAGTAGCCTCTGAATGCAGTTGTAGAATTAGCTCTTCCACCAATGACATCATCATTGACATGAAAAATGAACCACTCACTGGAAATTCTCAAAATCTTGATGGGTTTGACACAATTTCACAATTAGGCCTTCCTCCAATATTGACAAAGCCAGTGAAGTTTGATGATAAGGTCATTGAAGCCATTGAGTTGAGAAGATCAACTAAATTTGATGAGGTAAATTCTCATCAATCTCAAGCTGTTAAAGTTAGCAAAGAGGAAAGCAGTAGAACTAAGAGAGACAGAAAAACCAGTCCAATATGTAGAATTTCCTCTGCTAATTCTACTGGTATAAGACTTAGAGTCAATTCTCCCAAACTTGCAAGCAAGAAAGTTCAAGCCTATTCAAGAAGGAGTGTTTCATCCAAAGCAGGCAAGGCCTCAGTGGATACAGGGTTTCCAGAGGGATTTGCTGTTGTTAAGTCCTCACTTGATCCACAAAGAGACTTCAGGGAATCAATGGTGGAGATGATAGTGGAGAACAATATCCGAGCATCAAAAGATTTGGAGAACTTGCTTGCATGCTATCTTTCACTGAATTCAAGGGAATACCATGATCTCATTGTCAAAGCATTTGAGCAAATTTGGTATGACATGGCTCTACTTGGAATGTAA 1146 0.3883 MGNNRFRLSDMMPNAWFYKLKDMSKSRKKNGPHVMKNKVTSPTTSQRSQPRYSHCFSIEPNIAGKLYNSPIYTKHSDNIFIDSPRRSSKRRTKRKTIYKPSPTVVSSPVIESFSSHSTNWIKPNPPHSSDYYLSSSQSSYESNFHEYVSSESECDKFTIPGLLNGVASECSCRISSSTNDIIIDMKNEPLTGNSQNLDGFDTISQLGLPPILTKPVKFDDKVIEAIELRRSTKFDEVNSHQSQAVKVSKEESSRTKRDRKTSPICRISSANSTGIRLRVNSPKLASKKVQAYSRRSVSSKAGKASVDTGFPEGFAVVKSSLDPQRDFRESMVEMIVENNIRASKDLENLLACYLSLNSREYHDLIVKAFEQIWYDMALLGM 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00706 381 MobiDBLite consensus disorder prediction 239 263 - -
Vian6g00706 381 Pfam Transcriptional repressor, ovate 320 376 IPR006458 -
Vian6g00706 381 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 116 376 IPR038933 GO:0045892
Vian6g00706 381 NCBIfam uncharacterized plant-specific domain TIGR01568 314 376 IPR006458 -
Vian6g00706 381 Pfam DNA-binding domain 1 48 IPR025830 GO:0003677
Vian6g00706 381 MobiDBLite consensus disorder prediction 36 51 - -
Vian6g00706 381 MobiDBLite consensus disorder prediction 247 263 - -
Vian6g00706 381 MobiDBLite consensus disorder prediction 26 51 - -
Vian6g00706 381 ProSiteProfiles OVATE domain profile. 316 375 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00706 Vian-Chr6 23890879 23892024 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vian6g00706 Ovate 4.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00706 - - gmx:100784032 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00706 6 23890879 23892024 Vian6g00706 6 23890879 23892024 ECH
Vian6g00706 6 23890879 23892024 Vian7g01790 7 28132875 28134017 PCT