Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00700 ATGGAGAGTAAACCAAATATCTTAATGCAAAGATATGAGTTAGGAAGATTACTCGGTCAGGGAACCTTTGGAAAAGTTTACTATGGTAGAAGTGCAATAACTAACCAGAGTGTGGCTATTAAAATGATTGACAAAGATAAGATTATGAGAACGGGGCAAGTTGAACAAATCAGGCGTGAAATATCTGTTATGAGATTGACTAGACACCCCAATATTATTCAGCTGTTTGAGGTTATGGCTAACAAGAGTAAGATTTATTTTGTTATGGAGTATGCCAAAGGTGGTGAGCTCTTCAACAAGGTGGCCAAAGGAAAACTGAAGGAAGATGTGGCACACAAGTATTTTAAGCAGCTAATTAATGCTGTGGATTATTGTCACAGTAGAGGTGTGTTCCACAGAGACATAAAGCCTGAGAACATTCTATTGGATGAAAATGGAAATCTAAAGGTCTCTGATTTCGGATTAAGTGCTCTTGTTGAATCCAAGAGGCAAGATGGTTTACTACATACCCCTTGTGGCACACCTGCTTATGTTGCTCCTGAAGTCATTAAAAGGAAGGGATATGATGGCACAAAAGCTGATATATGGTCTTGTGGAATAGTTCTGTTTGTCTTGTTAGCAGGTTATCTCCCTTTTCATGACCCAAATTTGATAGAGATGTATAGGAAGATAAGCAAAGCAGAATTAAAATGCCCTAATTGGTTCCCACCTGATGTATGCAAGCTATTGGGCATGATGTTGGATCCAAATCCTGACACTAGGATTCCCATATCTATCATTAGGGAACATTGTTGGTTTAAGAAAGAACCTAACGTTAAAAACAAAAGACCTGTAGTGGAAAACAATACTGTCTCTTCTTCAGGTACTGTTCTTCCTGATCAAACTGATTGCTGTGATGGTTTAGCAGCAGAAGCAAACGGAGAGTCAGTTGCTCCCTTAAGTATAAATGCCTTTGATATTATCTCCCGTTCTCCGGGTTTTGATCTTTCTAGATTCTTTGATGACAGTTTCCGGATAAAGGAAGCAAGATTTAGTTCAAGGTTACCTGCAAATGTCATCATCTCCAAGCTGGAAGACATTGCTAAGCAACTGAGGATGAAAATAAAGAAAAAGGCTGCGGGTTTGTTGAAATTAGAGGGCTTGGAGGAAGGTAGGAAGGGGGTTTTAACCATTGATGCAGAGATCTTTGAAGTTACACCTTGTTTCCATTTGGTGGAGGTAAAAAAATCAAATGGAGACACATTGGAGTATCAGAAAATATTGAAAGAGGATATCAGGCCTGCTCTTCAGGACATTGTTTGGGTCTGGCAAAGTGACCAACAACTGCAATCACAACCGTCAGAGCAAGAACTGCAACAGACAGATGATCAGCAGCAACAACAATCACAGTCATAG 1395 0.3957 MESKPNILMQRYELGRLLGQGTFGKVYYGRSAITNQSVAIKMIDKDKIMRTGQVEQIRREISVMRLTRHPNIIQLFEVMANKSKIYFVMEYAKGGELFNKVAKGKLKEDVAHKYFKQLINAVDYCHSRGVFHRDIKPENILLDENGNLKVSDFGLSALVESKRQDGLLHTPCGTPAYVAPEVIKRKGYDGTKADIWSCGIVLFVLLAGYLPFHDPNLIEMYRKISKAELKCPNWFPPDVCKLLGMMLDPNPDTRIPISIIREHCWFKKEPNVKNKRPVVENNTVSSSGTVLPDQTDCCDGLAAEANGESVAPLSINAFDIISRSPGFDLSRFFDDSFRIKEARFSSRLPANVIISKLEDIAKQLRMKIKKKAAGLLKLEGLEEGRKGVLTIDAEIFEVTPCFHLVEVKKSNGDTLEYQKILKEDIRPALQDIVWVWQSDQQLQSQPSEQELQQTDDQQQQQSQS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00700 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Vian6g00700 464 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian6g00700 464 FunFam Non-specific serine/threonine protein kinase 92 273 - -
Vian6g00700 464 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian6g00700 464 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
Vian6g00700 464 CDD CIPK_C 316 430 - -
Vian6g00700 464 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Vian6g00700 464 Pfam NAF domain 312 370 IPR004041 GO:0007165
Vian6g00700 464 FunFam Non-specific serine/threonine protein kinase 310 434 - -
Vian6g00700 464 Gene3D Transferase(Phosphotransferase) domain 1 3 304 - -
Vian6g00700 464 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Vian6g00700 464 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 429 - -
Vian6g00700 464 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian6g00700 464 MobiDBLite consensus disorder prediction 445 464 - -
Vian6g00700 464 Gene3D Kinase associated domain 1, KA1 310 435 - -
Vian6g00700 464 ProSiteProfiles NAF domain profile. 310 334 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00700 Vian-Chr6 23804753 23806147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00700 1 440 CBL-interacting serine-threonine protein kinases AT5G58380 65.929 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Vian6g00700 Pkinase 6.5e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00700 - K07198 gmx:100790905 773.081