Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00696 ATGGCTTCCTCTTTCTCTTCATCAGCTAACATTGTTGCATTAGCTGTCTTATTGTTGCTTCTTACTGCAGGAACTTCTTCGGCTAACCTCTCAAACAACTTCTATTCTAAGAGATGTCCCAATGTTTTCAACACAGTCAAATCTGTCGTTAAATCTGCTGTGGCAAAAGAACCTCGCATTGGAGCATCGATTCTTCGCCTCTTCTTCCACGATTGCTTTGTTAATGGTTGTGATGGGTCATTACTGCTTGATGACACTGCATCGTTCTTGGGAGAGAAAACTGCAGCTGCTAACAACAATTCAGTGAGAGGTTTTGAAGTAATTGATGCCATCAAGTCTAGGGTGGAGAAACTGTGCCCTGGTGTTGTCTCCTGTGCTGATATCTTGGCCATTGCTTCCCGTGATTCTGTCGTCCTTAGTGAATGTGATTTGTTGGTGCAGCTTGGAGGACCATTTTGGAAAGTGAAGGTTGGAAGAAGGGATTCTAGAACAGCAAATTTCACTGCTGCTAACACTGGTGTTATTCCACCTCCTACCTCTAATCTGACCAACCTTATTAACACGTTTCAAGCTCAAGGACTCTCTACTAAAGACATGGTTGCCTTATCTGGAGCTCACACAATCGGAAAAGCAAGATGTACTAGTTTTAGAGATCACATATACAATGGAACTAACATTGACAGAAAATTTGCACTGCTGAGGCAGAGAAAGTGTCCTAGAACTAATGGCACAGGAGACAATAATCTAGCAGTTCTAGACTTGAGAACTCCGAAGCATTTTGACAACAACTACTTCAAGAACCTGCTGAACAAAAAGGGACTCCTGAATTCTGATCAGGTGCTTTTCAATGGTGGATCCACTGATTCACTGGTCAGAACTTACAGTCAGAATAACAATGTCTTTGATTCTGACTTTGTTACAGCAATGATCAAGATGGGAGATATCAAACCCTTAACTGGGTCACGAGGAGAGATTAGGAAGAATTGCAGGAGAGTGAATTAA 1002 0.4202 MASSFSSSANIVALAVLLLLLTAGTSSANLSNNFYSKRCPNVFNTVKSVVKSAVAKEPRIGASILRLFFHDCFVNGCDGSLLLDDTASFLGEKTAAANNNSVRGFEVIDAIKSRVEKLCPGVVSCADILAIASRDSVVLSECDLLVQLGGPFWKVKVGRRDSRTANFTAANTGVIPPPTSNLTNLINTFQAQGLSTKDMVALSGAHTIGKARCTSFRDHIYNGTNIDRKFALLRQRKCPRTNGTGDNNLAVLDLRTPKHFDNNYFKNLLNKKGLLNSDQVLFNGGSTDSLVRTYSQNNNVFDSDFVTAMIKMGDIKPLTGSRGEIRKNCRRVN 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00696 333 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g00696 333 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g00696 333 PRINTS Haem peroxidase superfamily signature 198 213 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g00696 333 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g00696 333 ProSiteProfiles Plant heme peroxidase family profile. 29 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g00696 333 FunFam Peroxidase 33 184 - -
Vian6g00696 333 PANTHER PEROXIDASE 72-RELATED 27 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g00696 333 CDD secretory_peroxidase 29 332 IPR033905 GO:0004601|GO:0042744
Vian6g00696 333 FunFam Peroxidase 176 312 - -
Vian6g00696 333 Gene3D - 33 333 - -
Vian6g00696 333 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Vian6g00696 333 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g00696 333 PRINTS Plant peroxidase signature 149 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g00696 333 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g00696 333 PRINTS Plant peroxidase signature 197 209 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g00696 333 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g00696 333 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g00696 333 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g00696 333 Gene3D Peroxidase, domain 2 176 312 - -
Vian6g00696 333 Pfam Peroxidase 46 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g00696 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 198 208 IPR019793 -
Vian6g00696 333 SUPERFAMILY Heme-dependent peroxidases 29 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00696 Vian-Chr6 23760631 23762569 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00696 5 333 Peroxidase AT5G58400 64.848 5.60e-156 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00696 K00430 - gmx:100813384 511.916