Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00694 ATGGGAGCATCTTTACTGCGTTTGCACTTTCATGACTGCTTTGTCAATGGCTGTGATGGATCAGTTCTGCTGGATGACACCCCAAATTTCACAGGGGAGAAGACTGCACTCCCAAATATTGGCTCAATCAGAGGTTTGGAGGTTATTGATGAAATCAAAGCAGCGGTTGACAAAGCTTGCAAACGTCCTGTGGTATCATGTGCAGATATCTTAGCAGTTGCTGCTCGTGATTCTGTTTCCATTTTGGGAGGTTCACTCTATTGGTACAAAGTGCCATTAGGAAGAAGGGACGCAAGAACTGCAAGCAAGGATGCTGCAAACTCAAACCTTCCTCCCCCATTTTTCAGCTTCTCCCAGCTTCTTGCAAATTTCCAAGCTCATGGACTTGACCTTCAAGATCTCGTAGCTCTTTCTGGTGCACACACCATTGGATTTGCACAATGCTCTACCTTTAGGAACAGAATTTACAACGACACCAACATAGAACCAAACTTTGCATCTTCCTTGCAGAGCACGTGCCCTAAAAGTGGTGGAGATAGCAATCTTTCACCGTTGGATCGTTTCACTCCCTCGAGAGTTGACACTTCATACTATACTTCTTTGCTAAGTAAAAGGGGTCTTCTCCATTCTGATCAAGAGCTCTTCAAAGGAGATGGCAGTGAAAGTGACTCTTTGGTGAGGCTCTACAGTAGGAACCCTTTTGCTTTTGCAAGAGATTTCAAAGCTTCCATGATCAAGATGGGTAACATGAAGCCTCTTACTGGGAATGCTGGAGAGATCAGAGTCAACTGCAGAAAAGTCAACAAAATGCTTTCGGAGTGA 822 0.4453 MGASLLRLHFHDCFVNGCDGSVLLDDTPNFTGEKTALPNIGSIRGLEVIDEIKAAVDKACKRPVVSCADILAVAARDSVSILGGSLYWYKVPLGRRDARTASKDAANSNLPPPFFSFSQLLANFQAHGLDLQDLVALSGAHTIGFAQCSTFRNRIYNDTNIEPNFASSLQSTCPKSGGDSNLSPLDRFTPSRVDTSYYTSLLSKRGLLHSDQELFKGDGSESDSLVRLYSRNPFAFARDFKASMIKMGNMKPLTGNAGEIRVNCRKVNKMLSE 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00694 273 Gene3D Peroxidase, domain 2 111 247 - -
Vian6g00694 273 PANTHER PEROXIDASE 72-RELATED 1 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g00694 273 Pfam Peroxidase 1 231 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g00694 273 FunFam Peroxidase 111 247 - -
Vian6g00694 273 ProSitePatterns Peroxidases proximal heme-ligand signature. 133 143 IPR019793 -
Vian6g00694 273 CDD secretory_peroxidase 1 267 IPR033905 GO:0004601|GO:0042744
Vian6g00694 273 PRINTS Haem peroxidase superfamily signature 133 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g00694 273 PRINTS Haem peroxidase superfamily signature 65 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g00694 273 PRINTS Haem peroxidase superfamily signature 2 16 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g00694 273 PRINTS Haem peroxidase superfamily signature 85 97 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g00694 273 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g00694 273 PRINTS Plant peroxidase signature 200 217 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g00694 273 PRINTS Plant peroxidase signature 64 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g00694 273 PRINTS Plant peroxidase signature 242 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g00694 273 PRINTS Plant peroxidase signature 4 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g00694 273 PRINTS Plant peroxidase signature 44 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g00694 273 PRINTS Plant peroxidase signature 132 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g00694 273 PRINTS Plant peroxidase signature 184 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian6g00694 273 ProSiteProfiles Plant heme peroxidase family profile. 1 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian6g00694 273 SUPERFAMILY Heme-dependent peroxidases 1 268 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian6g00694 273 Gene3D - 1 265 - -
Vian6g00694 273 ProSitePatterns Peroxidases active site signature. 2 13 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00694 Vian-Chr6 23718910 23721225 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00694 1 268 Peroxidase AT5G05340 60.741 1.72e-111 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00694 K00430 - gmx:100816580 504.982