Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00688 ATGGCTACTCAAAACACACCCTTCGAACTTGTCATGAAAGATGTTGTTCTTATCAAACCATCAAAACCAACACCTTCCTCTATTCTTCCTTTATCTACCCTAGACAATATACCTTTCCTTAATAGCCTATGCCACACCCTTCATGTATTTCGATCCAAAACTCATGATCTTGATGAACCGGGTTGCCCAAATAACCAACTGCTAGATCTTGCTGATGTGATTAAAGCAGCAATTTCAAAGGCTTTATTCTATTATTATCCTCTAGCAGGTAGGCTAGTATGGCACACCGATGGAAACTTCATGATCAACTGCAGTGCGGAAGGTGTTCCATTCTTGGAGGCCAGTGCTATTTGCCATCTTTCTTCTCTCCATTTCTTGGATGGCACTGACATGGAAAGTGCAAAACAGTTAGTGTTTGACCTTCCTTCTCAAGATGAAAGTGGCTACCATTATCCTTTGGTGTTCAAGGTGACAACTTTTCCTTGTGGGGGGTTCACCATTGGAATGGGGCTGTTACATACTGTTGGTGATGGCGTTGGAGCATCTCAGATCTTGAAAGCCATCATTGAGCTTGCAAGGGGGGAAAGTGAGCCCTCTGTGAAGCCTGTGTGGGAGAGAGAGAGGCTAAAGGGATCAATCACTGAACAGCCTTTGCTATTTGATTCAGTGGATGAGGCCTCAGCTGCTGTTTCACCCTTTCTTCCAACCGAAATTCTCGTGCAGGAATGCATTAAGGTTAACAGTGATAGCATCAGAAGACTGAAAATGAGTTTGATGAAGGAATCAGGTGAAAACGAAAACTTCACTAGTTTTGAATCACTAGCTGCATATGTGTGGAGGTCTAAATCTAGGGCCTTAAAATTGAACTATGATGGGAAAGTTAAGCTGACTATCACAGTTGGAGTGAGAAGGCACTTGCAGGATCCTTTGCCTGAAGGGTATTATGGAAATGCTATTGTGGATACTGACGTTGTTTTAACAGTGAGGGAACTGAATGAAAGGCCACTACATGAGATCGTGAAGCTCATAAAAGAAAGCAAGAAAGTTGCTTGTAACAGTGATTATGTGAGAAACTTCATCAACACTTTAGAGACAGGAGTAACGTATTCCAATATTGAAGGGAGTGGTGCATATACTGTGTTGACTGATTGGAGGTACTTGGGGTTCTTGGAAAAGATAGATTGTGGAGTTAAAGAACTTGTGAATACTTTACCAGTCGCTTCTGACATGTTTGGATCCGTTGATTTATGCATTTTCTCATCTCTTTGCAACTTGGAATCTTCAATGGAGGGAGGGGTTAGCATTTTTCAGTCCCTACCAGCTGCTGCATTGCTCAAGTTCAAGGAGGAGATGGAGGCTCTCAGCCTTTTGATTTGA 1377 0.4241 MATQNTPFELVMKDVVLIKPSKPTPSSILPLSTLDNIPFLNSLCHTLHVFRSKTHDLDEPGCPNNQLLDLADVIKAAISKALFYYYPLAGRLVWHTDGNFMINCSAEGVPFLEASAICHLSSLHFLDGTDMESAKQLVFDLPSQDESGYHYPLVFKVTTFPCGGFTIGMGLLHTVGDGVGASQILKAIIELARGESEPSVKPVWERERLKGSITEQPLLFDSVDEASAAVSPFLPTEILVQECIKVNSDSIRRLKMSLMKESGENENFTSFESLAAYVWRSKSRALKLNYDGKVKLTITVGVRRHLQDPLPEGYYGNAIVDTDVVLTVRELNERPLHEIVKLIKESKKVACNSDYVRNFINTLETGVTYSNIEGSGAYTVLTDWRYLGFLEKIDCGVKELVNTLPVASDMFGSVDLCIFSSLCNLESSMEGGVSIFQSLPAAALLKFKEEMEALSLLI 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00688 458 Pfam Transferase family 16 453 - -
Vian6g00688 458 Gene3D - 235 451 IPR023213 -
Vian6g00688 458 PANTHER ACYL TRANSFERASE 4 10 452 - -
Vian6g00688 458 Gene3D - 7 219 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00688 Vian-Chr6 23600118 23601494 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00688 9 364 Monolignol Biosynthesis Gene Families AT5G48930 29.863 1.17e-30 121