Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00687 ATGGCTACTCAAAACACACCCTTCGAACTTATCATGAAAGAAGTTGTTCTTATCAAACCGTCAAAACCAACACCTTCCTCTATTCTTCCTTTATCTACACTAGACAACATACCTGTCCTTTATAGCCCATGTCACACCCTTCATGTATTTCAATCAAAAACTCATGATCTTGATGAACCTGGTTGCCCTAATCACCAACTGCTAGATCCTGCTGATATGATTAAAGCAGCAATTTCAAAAGCTTTATTCTATTATTATCCTCTAGCAGGTAGGCTAGTGAAGGACACTGATGGAAACTTCATGATCAACTGCAGTGCAGAAGGTGTTCCATTCTTGGAGGCCAGTGCTAGTTGCAATCTTTCTTCTCTCCATTGCTTGGATGGCACTGACATGGAAAATTCTAAACACTTAGTGTTTGACCTTCCTTCCCAAAGTGAAAGTGGCTACCAATATCCCTTGGTGTTCAAGGTGACAACCTTTACTTGTGGGGGCTTCACCATTGGAATGGGGCTGTTACATACGGTTGGTGATGGCTTTGGAGCATCTCAAATCTTGAAAGCCATCATTGAGCTTGCAAGGGGGGAAAGTGAGCCCTCTGTGAAGCCTGTGTGGGAGAGAGAGAGGCTGAAGGGATCAATCACTAAACAGCCATTGTTATTTGATTCAGTGGATGAGGCCTCAGCTGCTGTTTCACCCTTTCTTCCAACTGAAATTCTCGTGCAGGAATGCATTAAGGTTAACAGTGACAACATCAGTAGACTGAAGATGAGTTTGATGAAGGAATCAGGTGAAAACGAAAACTTCACTACTTTTGAATCACTAGCTGCATATGTGTGGAGGGCTAAATCTAGGGCTTTAAAATTGAACTTAGATGGGAAAGTTAAGCTGACTATGGTAGTTGGAGTGAGAAAGCACTTGCAGGATCCTTTGTCTGAAGGGTATTACGGAAATACTGTTGTGGATATTGTCGTTGTTTTAACTGTGAGGGAACTCAATGAAAGGCCACTTTATGAGATTGTGAAGCTCATAAAAGAAACTAAGAAAGTTGCTTGCAACAGTGATTATGTCAGAAACTTCATCAACACTTTAGAGACAGGAGTAACGAATTCCAACATTGAAGGGTGTGGTGCACATACTGCATTGACTGATTGGAGGTACTTGGGGTTCTTGGAAAAGATAGATTGTGGAGTTAAAGAACTTGTGAATACTTTACCAGTCTCTTTTGGCATGTTTGGATCCATTGATTTATGCATTTTCTCATCTCTTTGCAACTTGGATTCTTCAATGGAGGGAGGGGTTAGTATTTTTCAGTCCCTACCAGCTGCTGCATTGCTCGAGTTCAAGGAGGAGATGGAGGCTCTCAGCCTTTTGATTTGA 1377 0.4176 MATQNTPFELIMKEVVLIKPSKPTPSSILPLSTLDNIPVLYSPCHTLHVFQSKTHDLDEPGCPNHQLLDPADMIKAAISKALFYYYPLAGRLVKDTDGNFMINCSAEGVPFLEASASCNLSSLHCLDGTDMENSKHLVFDLPSQSESGYQYPLVFKVTTFTCGGFTIGMGLLHTVGDGFGASQILKAIIELARGESEPSVKPVWERERLKGSITKQPLLFDSVDEASAAVSPFLPTEILVQECIKVNSDNISRLKMSLMKESGENENFTTFESLAAYVWRAKSRALKLNLDGKVKLTMVVGVRKHLQDPLSEGYYGNTVVDIVVVLTVRELNERPLYEIVKLIKETKKVACNSDYVRNFINTLETGVTNSNIEGCGAHTALTDWRYLGFLEKIDCGVKELVNTLPVSFGMFGSIDLCIFSSLCNLDSSMEGGVSIFQSLPAAALLEFKEEMEALSLLI 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00687 458 Gene3D - 235 451 IPR023213 -
Vian6g00687 458 Pfam Transferase family 14 453 - -
Vian6g00687 458 Gene3D - 8 219 IPR023213 -
Vian6g00687 458 PANTHER ACYL TRANSFERASE 4 11 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00687 Vian-Chr6 23583224 23584600 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00687 12 384 Monolignol Biosynthesis Gene Families AT5G48930 27.649 1.22e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00687 K20240 - gmx:100801843 481.1