Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00686 ATGGCTACTCAAAATACACCCTTCGAACTTGTCATGAAAGATGTTGTTCTTATCAAACCATCAAAACCAACACCTTCCTCTGTTCTTCCTTTATCTACCCTAGACAATATACCTTTCCTTAATAGCCTATGCCACACCCTTCATGTATTTCGATCCAAAACTCATGATCTTGATGAACCGGGTTGCCCAAATCACCAACTGCTAGATCTTGCTGATGTGATTAAAGCAGCAATTTCAAAGGCTTTATTCTATTATTATCCTCTAGCAGGTAGGCTAGTAAAGCACACTGATGGAAACTTCATGATCAACTGCAGTGCAGAAGGTGTTCCATTCTTGGAGGCCAGTGCTAGTTGCAATCTTTCATCTCTCCATTGCTGGGATGGCACTGACATGCAAAATGCAAAACACTTAGTGTTTGACCTTTCTTCTCAAGATGAAAATGGCTACCTATATCCCTTGGTGTTCAAGGTGACAACCTTTCCTTGTGGAGGTTTCACCATTGGAATGGGGATGTTACATACTGTTGGCGATGGCGTTGGAGCATCTCAGATCTTCAAAGCCGTCATGGAGCTTGCAAGGGGGGAAAGTGAGCCCTCTGTGAAGCCTGTGTGGGAGAGAGAGAGGCTAAAGGGATCAATCACTAAACAACCATTGCTAATTAATTCAGTGGATGAGGCCTCAGCTGCTGTTTCACCCTTTCTTCCAACCGAAATTCTCGTGCAGGAGCGCATTAAGGTTAACAGTGAAAGCATCAGAAGACTGAAGATGAGTTTGATGAAGGAATCAGGTGAAAACGAAAACTTCACTAGTTTTGAATCACTAGCTGCATATGTGTGGAGGTCTAAATCTAGGGCCTTAAAATTGAACTATGATGGGAAAGTTAAGCTGACTATCCCAGTTGGAGCGAGAAAGCACTTGCAGGATCTTTTGCCTGAAGGGTATTATGGAAATGCTATTGTTGATATTGTCGTTGTTTTAACAGTGAGGGAACTAAATGAAAGGCCACTGTATGAGATTGTGAAGCTCATAAAAGAAAGCAAGAAAGTTGCATGCAACCGTGATTATGTCAGAAACTACATCAACACTTTGGAGACAGGAGTAACGAATTCCAACATTGAAGGGAGTGGTGCATATACTGCGTTGACTGATTGGCGGTACTTGGGGATCTTGGAAAAGTTAGATTTTGGAGTTAAAGAACTTGTGAATAGTTTCCCTGTCCCTTCTGACATGTTTGGATCCGTTGATTTATGCATTTTCTCATCTCTTTGCAACTTGGATTCTTCAATGGAGGGAGGGCTTAGTATTTTTCTGTCCCTACCAGCTGCTGCATTGCCCAAGTTCAAGGAGGAGATGGAAGCTCTCAGTCTTTTGATTTGA 1377 0.4234 MATQNTPFELVMKDVVLIKPSKPTPSSVLPLSTLDNIPFLNSLCHTLHVFRSKTHDLDEPGCPNHQLLDLADVIKAAISKALFYYYPLAGRLVKHTDGNFMINCSAEGVPFLEASASCNLSSLHCWDGTDMQNAKHLVFDLSSQDENGYLYPLVFKVTTFPCGGFTIGMGMLHTVGDGVGASQIFKAVMELARGESEPSVKPVWERERLKGSITKQPLLINSVDEASAAVSPFLPTEILVQERIKVNSESIRRLKMSLMKESGENENFTSFESLAAYVWRSKSRALKLNYDGKVKLTIPVGARKHLQDLLPEGYYGNAIVDIVVVLTVRELNERPLYEIVKLIKESKKVACNRDYVRNYINTLETGVTNSNIEGSGAYTALTDWRYLGILEKLDFGVKELVNSFPVPSDMFGSVDLCIFSSLCNLDSSMEGGLSIFLSLPAAALPKFKEEMEALSLLI 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00686 458 Gene3D - 235 451 IPR023213 -
Vian6g00686 458 Pfam Transferase family 16 453 - -
Vian6g00686 458 Gene3D - 7 219 IPR023213 -
Vian6g00686 458 PANTHER ACYL TRANSFERASE 4 10 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00686 Vian-Chr6 23573265 23574641 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00686 12 396 Monolignol Biosynthesis Gene Families AT5G48930 27.848 1.35e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00686 K20240 - gmx:100783730 486.878