Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00685 ATGTCTTCTACTACTCTCCAATGGCTAAGCCTTGTTGGCACAATTTGGCTCCAAGCCATAATTGGGACAAACACTAATTTCCCTGCTTACTCTTCTCAGCTGAAGCAGCTTCTTTCCATCTCCCAAGTCCAACTCAATAACCTTGCTTTTGCCTCTGATGCAGGCAAGCTTTTTGGCTGGTTTTCTGGCCTTGCTTCTATATACCTCCCCCTTTGGCTTGTCCTCTTGACAGGTTCAACTCTTGGCTTGATTGGCTATGGTGTGCAATATCTCTTCATAACCGAACAGATTTCCTCTTTGTCTTATTGGCATGTGTTCTTACTAACTTTTCTTGCTGGCAATAGTATTTGTTGGATCAACACTGTGTGCTATGTTGTCACCATAAGGAACTTCTTATCAGATCGCCAAGTTGCTGTCGGAATAACAACTAGCTACCAAGGACTGAGTGCAAAAATCTACGCCAACATTGTTGATGCTGTTTCTCCTCACAAGAAGGCCAAAGCATTTCTCTTCCTGAACTCTCTCTTGCCTGTGATAGTTGGCCTAGTAGCTGCTCCTCTGGTCAGAGAATTTGATGCCACAAGTCCTAAGCACACGCGTGTTGGGTTTGCCGTGATGTTTGTCATAACAATTTTCACTGGAATATATGCTGTGTTAAGCAGCTTGCAATTTGTCACAAGCAAAGCATCCTCACTGGATATCATGACTGGTATCCTAGTGTGCCTTCTGTTGCCTCTTCTAGTCCCACTTTCAGTGAAGATCAAGGAACTACAGGATAATAGAGAAAATTTGAGAATTTACCATTTTACTATGGAGGAGAATAACAGTGAAGAGAGAGTGGAGAATGAGGTGAAAGAGGGTGAAGTTGAAGAAGAGATTGGACAGATTGCTGAATCTCGGGGTTGCTCCAATACTTCATCTTTGGTGTCTTTGTCATCATCCTTTGGATTCTTTGGCCGTCTCATGCCATCTCTAATGTACTACTTCTACAGGGGACAGTGTAGAATTTCAAGACCAGCTTCACTGTTGGCAGCTATGGTTCCAACATCAGGAGCATTTTTTTTGCTTCTCAACAGAACTGATCTTGCTCTTTACATTAGCACTGCGGTGATTGGAGTGTGTACGGGAGCAATCACTTCCATTGCTGTTTCCACAACCACTGAGCTGTTTGGTACAAAGCATTTTTCAGTGAACCATAATGTGTTGGTGGCCAACATTCCTATGGGATCCTTCATATTTGGCTATTCAGCTGCACTTGTTTACCGTAATGAAGGACATGAACACTATGAGCATGGGCAATGCATGGGCATGGAATGCTACAGAAACACTTTTATCATCTGGGGTTCCTTGTGTTTCTTTGGAACTCTTTTGGCTTTGATTCTTCATCTTCATGATACAGTGATAGAGGCACATGGAGATAGATATATAGCCCTAGTTCTTATTCGTGGAATTCTTCGGCTTGGTCTTCCGTTGCTTAGGAACGAAAATCTAGTGTGTTTGTGCGCTGAGCGAGGCCGACCGTCAAGGTGTTGTTCGTCGGAGGTCCGGGTGCCTCCAATCGAGGGGCTTTGGCATGTGTTCGCTCCCGCACCGAGCATCAAGGTAAACCGGCAAGCTCTCTCTACTTTTGCCTCTGTACAGATTTTCTAA 1650 0.4412 MSSTTLQWLSLVGTIWLQAIIGTNTNFPAYSSQLKQLLSISQVQLNNLAFASDAGKLFGWFSGLASIYLPLWLVLLTGSTLGLIGYGVQYLFITEQISSLSYWHVFLLTFLAGNSICWINTVCYVVTIRNFLSDRQVAVGITTSYQGLSAKIYANIVDAVSPHKKAKAFLFLNSLLPVIVGLVAAPLVREFDATSPKHTRVGFAVMFVITIFTGIYAVLSSLQFVTSKASSLDIMTGILVCLLLPLLVPLSVKIKELQDNRENLRIYHFTMEENNSEERVENEVKEGEVEEEIGQIAESRGCSNTSSLVSLSSSFGFFGRLMPSLMYYFYRGQCRISRPASLLAAMVPTSGAFFLLLNRTDLALYISTAVIGVCTGAITSIAVSTTTELFGTKHFSVNHNVLVANIPMGSFIFGYSAALVYRNEGHEHYEHGQCMGMECYRNTFIIWGSLCFFGTLLALILHLHDTVIEAHGDRYIALVLIRGILRLGLPLLRNENLVCLCAERGRPSRCCSSEVRVPPIEGLWHVFAPAPSIKVNRQALSTFASVQIF 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00685 549 Pfam Nodulin-like 7 249 IPR010658 -
Vian6g00685 549 SUPERFAMILY MFS general substrate transporter 313 462 IPR036259 -
Vian6g00685 549 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 274 - -
Vian6g00685 549 SUPERFAMILY MFS general substrate transporter 11 248 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00685 Vian-Chr6 23542604 23546437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00685 1 465 Nodulin-like Gene Family AT2G30300 44.961 1.59e-129 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00685 - - gmx:100800763 733.791