Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00682 ATGGAAAACATGAAGACACCCCTTGTCCTTGATATGAAGGATGTTGTTATAGTTAAACCCTGCAAGCCCACACCATCTGAACTTCTTCCTCTGTCCACCATTGACAGTGATCCTGTTCTCAACATTCTGTGTCAGACCATTTATGTTTACAAAGCAAATCTTGATTCCCCAAATGGCCAACTTGATCCTGCTCAGGTGATAAAAGAAGCTCTCTCAAAGGTTTTGGTTTACTATTATCCTCTTGCTGGGAAGATAGTAACATTTGATGATGGAAAACTTGGAATCAACTGCAATGCTGATGGAGTTCCATTTTTGGAGGCAACTGCTAACTGTGAACTCTCTTCTCTTCATTATCTAGAAGGGATCGATGTTCCAACTGCACAGAAATTGGTCATTAATAATGATAACCCTTCTGAAGGTGAAAACCACGCCCTGGCTTTCATGGTGACAAAGTTTCTCTGTGGGGGTTTCACTCTTGGCATGGGGTTGTCACACAGTGTTTGTGATGGGTTTGGTGCATCTCAATTCTTCAGAGCCTTGGCTGAACTTGCATGTGGAAAAAGTGAGCCCTCGGTGAAACCTGTGTGGGAGAGGGAGAGACTAATGGGGACACTTCTTAAGGAACAACTCCAATTTCCCATTGATGAGACTTCAAGGGCAGTTTCACCATTTTGGCCAACCAATGAGATTTCACATGAATGCTTTAACTTCAACGCCAAGAGCATACAAAGACTCAAAATGGAACTGATGAAGGAAAGTGTTGATGTGAAGGAAAGCTTCACAACTGTTGAAACACTTGGTGCCTATGTTTGGAGGTCAAGGGCTAGAGCTTTGGAATTGAACTCTGATGGGAAAACTATGTTGTGTTTAGCTGTAGGGGTGAGACGTCTGTTGAATCCACCCTTGCCTGAAGGGTATTATGGGAATGCTTTTGTGGGTTCATATGTGGTGCAAACAGTGAAAGAACTTGATGAAAGACCATTCTCAGAGATTGTGAAGCTCATCAAAGAGAGCAAAAAGCTTCCTTCCAATAATGAGTATATCAGAAACACAATAAACATGTTAGAGACAATTAGACAGACAAACATAAGGGTTGAAGGAACATGTGCATCTGTGGTGTTAACAGATTGGAGACAGCTGAGTTTGTTGGAAGAAGTGAACTTTGGATGGAAGGCTTCAGTGAATATAATACCAGTTCCGTGGAATATGTTAGGGTATGTGGACTTATGCCTTTTCTTGCCTCCTAGTAACTTGGATCCTTCAATGAAAGCAGGAGTTAGGGTCTTTGTTTCCCTGCCCAAAGCTTCGATGCCCAAGTTTAGGGAAGAGATGGAGTCACTGAAGCTTACGAGAGCTGATGATAATAGCACCTAG 1374 0.4243 MENMKTPLVLDMKDVVIVKPCKPTPSELLPLSTIDSDPVLNILCQTIYVYKANLDSPNGQLDPAQVIKEALSKVLVYYYPLAGKIVTFDDGKLGINCNADGVPFLEATANCELSSLHYLEGIDVPTAQKLVINNDNPSEGENHALAFMVTKFLCGGFTLGMGLSHSVCDGFGASQFFRALAELACGKSEPSVKPVWERERLMGTLLKEQLQFPIDETSRAVSPFWPTNEISHECFNFNAKSIQRLKMELMKESVDVKESFTTVETLGAYVWRSRARALELNSDGKTMLCLAVGVRRLLNPPLPEGYYGNAFVGSYVVQTVKELDERPFSEIVKLIKESKKLPSNNEYIRNTINMLETIRQTNIRVEGTCASVVLTDWRQLSLLEEVNFGWKASVNIIPVPWNMLGYVDLCLFLPPSNLDPSMKAGVRVFVSLPKASMPKFREEMESLKLTRADDNST 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00682 457 Pfam Transferase family 16 446 - -
Vian6g00682 457 PANTHER ACYL TRANSFERASE 4 10 446 - -
Vian6g00682 457 Gene3D - 9 212 IPR023213 -
Vian6g00682 457 Gene3D - 226 444 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00682 Vian-Chr6 23518963 23520336 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00682 10 407 Monolignol Biosynthesis Gene Families AT5G48930 28.162 5.54e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00682 K20240 - gmx:100801843 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00682 6 23518963 23520336 Vian6g00682 6 23518963 23520336 ECH