Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00654 ATGGCTGCAGCGATGGAGTGCTGGTCGCGCCGCACCACCAGTGACGAGGACGACGCATTCCTCACCGCGCATTCCTCGCAACCCCGAGACTCTTCTTCTTCGTCTTCCCCCTCTTCCTCTCTCGTCCACAAGAAGCTCCTCAAACTCACGCGCAACGTCTCCGAGGCTCTCTCCTCCCTCAGAAACTCCCTTACCACTATGAATGATTCTTCCAAACCCGACGCACCTCGCAACCTTGTGTGGACCGCCGTCGTGCGAAATCTCAGCCACATATACCCCGGGACCCATCTCCCTGAGAAGCTTGTCTGCAACATTCGCAAGCACTATGACTCCCTGCCTCTCAGTTATTCTCAGGCAGGGTTTGATGTAAAAGATGTGTTTCTTCACATGAAGCTGATGGAGCAAGCTTTGGAAGATGAGCAGGCTGCGATTTTGATTCAAGATGAGGGTGATGGTGAGATTCAACTTCAGGGGTCTTTGTTCAAGTTGACATTCGCTTGCAACTCTCCTATTTCATGGCCCGCAATGTCAAGAGCGTTGGATGGTTACTCCATTTGCTGCAAGAAGATTCAGATATTTGAGAAGAAAGGATTCACCCTTGGGATTGTGCTTCTTCTTGTACTGTCAAGTGGTCAGCATGATAAGTTGGTCAGGACCCAGGTTGAAAATGCTCTCAAGATATCCATGAAGAGGCCTAAAGCCAGCGGTGTGAAGCTTCCCTTTGGTCTTTGTGGATGTCAAGAAGAGAACACCAAAGGGAGAGGACATGGAGAGATCGAGGAAGATGGTTGTGATGCATGTTGTGGAAATGGGTTTGATAATTTGAGCCAAAAGTTTCAGCTTCAGGTGCCATTACCTAGTTCATCTTTTCTTGTAGTGGTAGATGAATGGCAGACTATTCAATCAGGTGGGAATGATATTGAAAAATGGTTGTTGAACTCAGATCGTCTTGAGTTTGCAGAACAGATTGGGCCCAATTCGTATAAGGGGATGTACATGGGAAGAAAAGTTGGCATCGAGAAGCTTAGAGGGTGTGATAAAGGGAACTCTTACGAGTTTGAGCTCAGGAAAGACCTGCTGGCATTGATGACCTGTGGTCATAGAAATATTATGCAATTTTTTGGTGTTTGTGTGGATGAAAACTATGGGTTATGTGTATTGACAAAACTTGTGGAAGGTGGATCTGTTCATGACTTAATGTTAAAGAATAAGAAGCTTTCGAGCAAGGATGTTGTAAGAATTGCAGTTGATGTGGCTGAGGGGATGAAGTTTATGAATGATCACGGTGTTGCATACAGAGACCTTAATACGCAGAAGATTGTTTTGGATAAGCATGGGAATACTTTCTTGGGTGATATGGGTATTGTCACTGCTTGCGAGAGTGTTGGAGAGGCAATGGAGTATGAAACTGATGGTTATCGGTGGCTAGCACCAGAGATAATTGCTAGTGATCCAGAGAGTGTAACAGAGACATGGATGAGTAATGCTTATAGTTTTGGAATGATTATTTGGGAGATGGTAACTGGTGAGGCAGCATATTCTGCATATTCACCCGTGCAAGCAGCAGTTGGCATTGCTGCTTGTGGCCTAAGACCTGAAATCCCCAAGGACTGCCCTCAAACTCTAAAGTCTCTCATGATAAAGTGCTGGAACAACACCCCTTCAAAACGCCCTAACTTCTCTGAAATTTTGGCCATATTGCTACGACAAAACAATTACAATAGGTAA 1728 0.4554 MAAAMECWSRRTTSDEDDAFLTAHSSQPRDSSSSSSPSSSLVHKKLLKLTRNVSEALSSLRNSLTTMNDSSKPDAPRNLVWTAVVRNLSHIYPGTHLPEKLVCNIRKHYDSLPLSYSQAGFDVKDVFLHMKLMEQALEDEQAAILIQDEGDGEIQLQGSLFKLTFACNSPISWPAMSRALDGYSICCKKIQIFEKKGFTLGIVLLLVLSSGQHDKLVRTQVENALKISMKRPKASGVKLPFGLCGCQEENTKGRGHGEIEEDGCDACCGNGFDNLSQKFQLQVPLPSSSFLVVVDEWQTIQSGGNDIEKWLLNSDRLEFAEQIGPNSYKGMYMGRKVGIEKLRGCDKGNSYEFELRKDLLALMTCGHRNIMQFFGVCVDENYGLCVLTKLVEGGSVHDLMLKNKKLSSKDVVRIAVDVAEGMKFMNDHGVAYRDLNTQKIVLDKHGNTFLGDMGIVTACESVGEAMEYETDGYRWLAPEIIASDPESVTETWMSNAYSFGMIIWEMVTGEAAYSAYSPVQAAVGIAACGLRPEIPKDCPQTLKSLMIKCWNNTPSKRPNFSEILAILLRQNNYNR 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00654 575 MobiDBLite consensus disorder prediction 19 39 - -
Vian6g00654 575 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 76 567 - -
Vian6g00654 575 Pfam Protein tyrosine and serine/threonine kinase 351 566 IPR001245 GO:0004672|GO:0006468
Vian6g00654 575 MobiDBLite consensus disorder prediction 1 39 - -
Vian6g00654 575 Gene3D Transferase(Phosphotransferase) domain 1 310 572 - -
Vian6g00654 575 SUPERFAMILY Protein kinase-like (PK-like) 294 567 IPR011009 -
Vian6g00654 575 ProSiteProfiles Protein kinase domain profile. 317 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00654 Vian-Chr6 23234260 23237837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00654 300 567 MAP Kinase Kinase Kinase AT2G17700 31.136 7.06e-49 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Vian6g00654 PK_Tyr_Ser-Thr 2.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00654 - - gmx:100819097 942.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00654 6 23234260 23237837 Vian6g00654 6 23234260 23237837 ECH
Vian6g00654 6 23234260 23237837 Vian7g01901 7 30218124 30222398 PCT