Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00636 ATGCATGGGACCTCTTCTCAAAAACAAAACACACAAAATCTAAACTCAAACATCATTTCATCTCTGTCAGAGCTCTTCCTCGGAATACTCCTAATCATGGCGGAGTGTGTGTCGGACACGGCTCAGGCTGCTCTTTGCCGCAACAGCACCGCTGCAGCACATTTGAAAGTGATTTCCATCTTCACAATCTTCGTAACCAGCGTGATGGGTGTGTCCATGCCTGTCATGCTAGCACGATACTTTCAAGGAAAGTCTCTCTATGATATAGCTATCTTGGTAATCAAATGTTTTGCTGCGGGTGTTATTCTCGCCACCTCATTGGTTCATGTGTTACCGGACGCATTTGCCGCACTCTCCGATTGTCAGGTGGCATCGCAACATCCTTGGAAGGATTTTCCCTTTGCTGGCCTGGTGACTCTGGGTGGGGTTCTGCTGGCTCTGCTCGTGGACACTGTTGCCAGCTCTCACGTGGAGCATACGCACTACACGCCGGTGGAAACGGAGGAGAAGGAGGGTGGCGCTGGCTCATTGAGTATCGAGCTGGTAAGTGGCGGCGGTGGCGGCGGTGAAGCGGACAGGGTTGAAGAGTTGATGAGGTTGAAGCAGAAGCTGGTGTCGCAGGTATTGGAGATAGGTATAATCTTTCACTCTGTTATCATCGGAGTGACTATGGGAATGTCCCAGAATGTTTGCACCATTCGCCCTCTCGTTGCTGCTTTGTCATTTCATCAGATTTTCGAAGGCTTAGGTCTTGGTGGTTGCATTGCTCAGGCAGGATTTGGATTTGGAACAACTGCATACATGTGTTTCATGTTCTCAGTAACAACACCGGTGGGAATAATTTTAGGAATGGTGTTATTCTCGGTGACTGGTTATGATGATAGTAACCCAAAAGCTTTGATCATGGAAGGATTACTGGGTTCAGTTTCTTCAGGGATACTGATTTACATGGCTCTTGTTGATCTCATAGCAGTTGATTTCTTTCATAACAAGCTTATGAACTCCAATTTGTGGCTCAAAAAATTCTCATTTCTTGCTCTAACTCTTGGCTCTGCTACTATGTCTGTTCTCGCACTTTGGGCCTGA 1086 0.4715 MHGTSSQKQNTQNLNSNIISSLSELFLGILLIMAECVSDTAQAALCRNSTAAAHLKVISIFTIFVTSVMGVSMPVMLARYFQGKSLYDIAILVIKCFAAGVILATSLVHVLPDAFAALSDCQVASQHPWKDFPFAGLVTLGGVLLALLVDTVASSHVEHTHYTPVETEEKEGGAGSLSIELVSGGGGGGEADRVEELMRLKQKLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVAALSFHQIFEGLGLGGCIAQAGFGFGTTAYMCFMFSVTTPVGIILGMVLFSVTGYDDSNPKALIMEGLLGSVSSGILIYMALVDLIAVDFFHNKLMNSNLWLKKFSFLALTLGSATMSVLALWA 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00636 361 PANTHER ZINC/IRON TRANSPORTER 52 355 - -
Vian6g00636 361 NCBIfam ZIP zinc/iron transport family 41 361 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vian6g00636 361 Pfam ZIP Zinc transporter 54 358 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00636 Vian-Chr6 23001913 23003305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00636 33 361 Inorganic Solute Cotransporters AT2G30080 64.857 6.72e-155 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00636 K14709 - gmx:100784745 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00636 6 23001913 23003305 Vian6g00636 6 23001913 23003305 ECH
Vian6g00636 6 23001913 23003305 Vian7g01913 7 30413785 30415800 ECH
Vian6g00636 6 23001913 23003305 Vian7g01913 7 30413785 30415800 PCT