Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00624 ATGGTAATGAAAGGTCTTGATAATGGGAGCAGAAAGCGCAAACGACAGACTTCAAGAAAGCTTGGAGTGGATGCAAAAGTGGAGCAATTTAGAGTTTTCGGAGACCCGGTTGAAGGATGGCTGGGTCGTCCCGGAAGAAGTGAAACTCCCGCGGTGTCTGGAAGCCTCGGGAATCTGATAATGCGAATGACACTGAAGAGGATGTTGGGGTGGAGTGAGTGTGAGAGTGAGGAAGAAGAAGGGTTTAGAAGAGAGGTGCGGAGTATGGACAACGGGTTTCAAGGATCGTGGCACCCCGGGACAGTTATCATGTGTGAGGATTTGCAACGGCGTGTCAGATATAACAATATTTTGGATAACGAGGGGGTGTATAATCTTGAGGAGGTTGTGATTGTTTCAAAAGCTTTGGACGGTGATATTGAATGTGCAGACTTCTATGCACGCGGGTTCATCAGGCCACTGCCTCCTTTGGTTGAGTTTGATATGGGGGACCTTGTATATGGTTTATGTGTTGATGTGAACTATGAGGAAGCTTGGTGGGAAGGAGTTATATTTGACTACTGTGATGGAATGGACAAGAGGAGTGTGTTTTTCCCTGATTTGGGTGATGAAATACCGGTTGAAATTCATCAGTTGCGGATTACTCAGGACTGGGATGAAATTACTGAGGAGTGGACCCGACGAGGGAACTGGGTGTTTCTTGATCTGGTGGAGGAGCAGAAGAGGAACTTGTTTGTCACAGTTTCGGCCAAGCAGATTTGGTATGATATACGCATTAAAAAGGAATTTGAGACGATTAGAGAGTGGACATGTAATTTGAAGTACTTGTGGACCGAGTTGATAAAGGAGATAATTAATCACTACTTCTCTCTAACGTTAAAGGAAATTATCTCTGTCCTAAACCTTCCTCGGAGTCTTTTAAATGAAACACCAGAGCATGAATTTGCTGAAGCTATGCCTAATGTTGACTTAAGCATGATCTGGCATAATAAGCAAACTGCTGTGCAGAAAGGAACTGTCCCTCGTATTAAAGGGACCTTATCTGACGTTCAAAATGAAATTAGACCCTGTGGTGATAGTCCTTTTGATGAAAGCAGAGAAGATAGATCCTCAAGTCATTTAATGTCCTCTTTTTGGAATCCTGTGAAGTTGTCTGGGGTTGAATTATGCCCTGATGCTGTTAGGGAATATCCACTTGCTTCCAAACGTGAAGTTAGGGCATTTTGGATGGACAAATTACAAAAGCATCTTTTATGTCTTGGATGGAAAATTGAATGGTCAAATAGATTAAATATTAAACGTTACAAGTATATTTCCCCTTACACGAAGGGCCAAAGGTATTACCTTTCACTCATTGAAGTTTGTAAAGCTATGAAACAGGACCCCAACATGAACTCCTTGCATCTCCAAAATGATCAGACCATAACGCATCCTACAGTTGATTTCCATCTTTCAGATGTGCCTTCTATTCCAGCTGAAAATATTCAGTCTATAACGCATCTCCAAAATGATCACACTATAATGCATCCTACAGTTGATTGTCCTCTTTCAGACGTGCCTTCTATTCCAGCTGAAAATATTCAGTCTGTAACGCATCTCCAAAATGATCACACTATAATGCATCCTACAGTTGATTGCCATCTTTCAGATGTGCCTTCTATTCCAGCTGAAAATATTCAGTCTATAACGCATCTCCAAAATGATAACACTATAATGCATCCTACAGTTGATTGTCATCTTTCAGATGTGCCTTCTATTCCAGCTGAAAATATTCAGTCTATAACGCATCTCCAAAATGATCACACTATAATGCATCCTACAGTTGATTGTCATCTTTCAGATGTGCCTTCTAGTCCAGCTGAACATATTCAGTCTATAACGCATCTCCAAAATGGTCACACTATAATGCATCCTACAGTTGATTGTCATCTTTCTGATGTGCCTTCTAATCCAGCTGAAAATATTCAGAATCTAGATATCATTCATGCAGCTGAAAATATTCAGAATCTAGATATCATTCCTCCAGCTGAAAATATTCAGAATCTAGATGTCATTCCTCCAGCTGAAAATATTCAGAATCTAGATATGTTTCCTCCTGCTGAAAATATTCAGAATCTAGATATGTTTCCTCCTGCTGAAAATATTCAGAATCTAGATATCTTTCCTCCTGCTGAAAATATTCAGAATCTAGATATCTTTCCTCCCGCTGTGCCATCTTCTCCAGTTGAAGATGAAGTTGAAGAAGTACCTGAGTATTGTCCTTGGGCTGTTGTGCAGTATTATCGCATGTATATATACAAGAAGAGCCGGGCTGATAAAAAAAAGTGGATACTAAAGGCAAAGAAGCATCTGTTATCAGAGGGATGGGTTTTAGACCATCCACCTCCATTTAATAAGAGAAGGGGAATAATATACATGTCTCCACAAAATCGGAAATTCCCAACACTCCATGCAGCATGCAAATTTTGCATTGAAGAAACTATTCCTAATTGGGACCTTGAATGGCAGGAGATGGATGAAGGTGCTTCTAGTATTAAACCAACTACAAATCAAAAGAAGAAAAACAAGAGGGATTTGAAGGCCAACACACCTAAGGGCCAAAGCAATGGACCTCGACAGGTGCTAAGATCAAATAAGAGGGTGCAAAAGGTGTCTGCCTCTACTCATTTACATCACAAGCCTCTAAACATTCCGTCTTATTTGATAGACAGCAACATCATCTTACCAAGGTCTAAGGTTTATTATAAGGCAAAAGGCACGAACCGTGCAGTCCGAACTTTGGCTGAGGGGAAAATAACTCATGATGGAATCAAGTGTAACTGTTGCCTTACAATATACAGTTTTGCTGGATTTGAAAAACATGCTACTGGCAGTAGTACCTGCAGACCCTCTGCTAATATCTTTTTGGATGACGGGAAGTCACTCTTGGACTGCCAGATACAAATGATGCAAGGTCAAAAGAATAGTGTAGCTAGTGGAAAAGCATTAAGTGATCTTTCTCTAGCTGATAATGACTACATTTGTTCAGTTTGTCGCTATGGTGGTGAACTTATTTTATGTGATAAATGTCCATCCTCATTCCATAAGACGTGTCTTGGTTTGGAGGTGACTGGTTTTGTCCATCATGTCGTTGCGGGATTTGTGGCCAAAGGAAAATTGATGGAGATGAGGTTGAACACTTCCTTTCTTGCATACAATGTGAACATAAATATATACGAGGGCCTTCATAAATTATTAGGAGAGCCAATTCCAGTGGCTAGCAATCTAACTTGGACTTTGGTGAAGTTTATCAACCCTGACAGTTGTGATCTTGGTAATGTTGAAAGTGACTTAGTGGCAGAAAGTTACTGCAAACTCAATCTTGCTCTTTCGTTGATGCATGAATGTTTTGAGCCCCTAAAAGAACCCTTGACTTCCAGAGATCTCGTGGAAGATGCTCTATTCAGCAGAAGGTCAGAGCTTAACCGAATAAATTTCCAGGGTTTCTACACTGTGCTACTTGAGAGAAATGAAGAACTGGTTAGTGTGGCAACTGTTAGGGTCCATGGGAAGAAGGTAGCTGAAATACCTCTTGTTGGTACCAGATTACAATATCGTCGACATGGAATGTGTCGCATTTTAGTAAATGAGCTTGAAAAGAAGCTCATGAAATTAGATGTGGAGAGGCTGGTTTTGCCGGCTGTTCCTAGTGTGCTAGAGACATGGACCGGCTCTTTTGGCTTTGCAAAGATGACTGATTATGAGAGATCTCAGTTTCTGGACTATACTTTCCTAGATTTTGAGGGTACCATTATGTGCCAAAAGTTGTTGATGAACATAGCATCTTCAGATTCAGTTTTGTTAACAGAGTCTAAACGTTGCTGTTTTAACCCCAGTAAGTCTGGTCCCATATGTGAAGTGCACCAAGGAGAAGCTATTGACGAAAATGCTTGTGCTGGCAATAATGATCACCATGATTTAAGAGCTATTGACCCATTTAGAATGGTAAAGGAACCGGATCAACAGTGTCAGAAAGGAACAACCAGTAGTGTGTGCTCGTTTGATGAACTAGTTGAAAGGAATGATGATGATCTGTATAAGTTTGTCTACACACGAAAGAAAATGAGAAAATGA 4113 0.406 MVMKGLDNGSRKRKRQTSRKLGVDAKVEQFRVFGDPVEGWLGRPGRSETPAVSGSLGNLIMRMTLKRMLGWSECESEEEEGFRREVRSMDNGFQGSWHPGTVIMCEDLQRRVRYNNILDNEGVYNLEEVVIVSKALDGDIECADFYARGFIRPLPPLVEFDMGDLVYGLCVDVNYEEAWWEGVIFDYCDGMDKRSVFFPDLGDEIPVEIHQLRITQDWDEITEEWTRRGNWVFLDLVEEQKRNLFVTVSAKQIWYDIRIKKEFETIREWTCNLKYLWTELIKEIINHYFSLTLKEIISVLNLPRSLLNETPEHEFAEAMPNVDLSMIWHNKQTAVQKGTVPRIKGTLSDVQNEIRPCGDSPFDESREDRSSSHLMSSFWNPVKLSGVELCPDAVREYPLASKREVRAFWMDKLQKHLLCLGWKIEWSNRLNIKRYKYISPYTKGQRYYLSLIEVCKAMKQDPNMNSLHLQNDQTITHPTVDFHLSDVPSIPAENIQSITHLQNDHTIMHPTVDCPLSDVPSIPAENIQSVTHLQNDHTIMHPTVDCHLSDVPSIPAENIQSITHLQNDNTIMHPTVDCHLSDVPSIPAENIQSITHLQNDHTIMHPTVDCHLSDVPSSPAEHIQSITHLQNGHTIMHPTVDCHLSDVPSNPAENIQNLDIIHAAENIQNLDIIPPAENIQNLDVIPPAENIQNLDMFPPAENIQNLDMFPPAENIQNLDIFPPAENIQNLDIFPPAVPSSPVEDEVEEVPEYCPWAVVQYYRMYIYKKSRADKKKWILKAKKHLLSEGWVLDHPPPFNKRRGIIYMSPQNRKFPTLHAACKFCIEETIPNWDLEWQEMDEGASSIKPTTNQKKKNKRDLKANTPKGQSNGPRQVLRSNKRVQKVSASTHLHHKPLNIPSYLIDSNIILPRSKVYYKAKGTNRAVRTLAEGKITHDGIKCNCCLTIYSFAGFEKHATGSSTCRPSANIFLDDGKSLLDCQIQMMQGQKNSVASGKALSDLSLADNDYICSVCRYGGELILCDKCPSSFHKTCLGLEVTGFVHHVVAGFVAKGKLMEMRLNTSFLAYNVNINIYEGLHKLLGEPIPVASNLTWTLVKFINPDSCDLGNVESDLVAESYCKLNLALSLMHECFEPLKEPLTSRDLVEDALFSRRSELNRINFQGFYTVLLERNEELVSVATVRVHGKKVAEIPLVGTRLQYRRHGMCRILVNELEKKLMKLDVERLVLPAVPSVLETWTGSFGFAKMTDYERSQFLDYTFLDFEGTIMCQKLLMNIASSDSVLLTESKRCCFNPSKSGPICEVHQGEAIDENACAGNNDHHDLRAIDPFRMVKEPDQQCQKGTTSSVCSFDELVERNDDDLYKFVYTRKKMRK 1370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00624 1370 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1109 1259 IPR000182 GO:0016747
Vian6g00624 1370 SUPERFAMILY FYVE/PHD zinc finger 1002 1037 IPR011011 -
Vian6g00624 1370 MobiDBLite consensus disorder prediction 862 878 - -
Vian6g00624 1370 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1123 1251 IPR016181 -
Vian6g00624 1370 MobiDBLite consensus disorder prediction 842 878 - -
Vian6g00624 1370 PANTHER PHD FINGER PROTEIN 12 1070 1301 IPR042163 GO:0003714|GO:0045892
Vian6g00624 1370 CDD NAT_SF 1165 1225 - -
Vian6g00624 1370 Pfam Agenet domain 85 156 IPR008395 -
Vian6g00624 1370 MobiDBLite consensus disorder prediction 1 21 - -
Vian6g00624 1370 Pfam Tify domain binding domain 930 982 IPR032308 -
Vian6g00624 1370 Gene3D - 1116 1247 - -
Vian6g00624 1370 CDD Tudor_Agenet_AtDUF_rpt1_3 85 156 - -
Vian6g00624 1370 SMART agenet_At_2 163 220 IPR014002 -
Vian6g00624 1370 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1000 1043 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00624 Vian-Chr6 22792108 22809777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00624 87 494 PHD Transcription Factor Family AT5G58610 33.641 1.41e-61 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00624 - - vum:124829293 2407.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00624 6 22792108 22809777 Vian6g00624 6 22792108 22809777 ECH
Vian6g00624 6 22792108 22809777 Vian7g01928 7 30941800 30947093 PCT