Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00596 ATGGCATTCCCAGAATCACCTGAAACTCAGACAAAACCAGAAAACGTGAGCAACTCCAATTGCAAATCGCACCGTGCCGAAAGACACACACCGAGTTTGCTCCGACCAATCGAGAACCACGACCAAGCGAAATTCCAAATCGCGAGTGCTGCGACGAACCCTAAATCGCCTAAGCCTCTCCGCTATCGCGCCTTCATCTCGCAAGCTCCCCTGCAGCGACGCCATCCTCCATCAACGCCACCTTCAATGCGCAAAATCCTTGCAAGCCGCGACATCCTCTCTCGCGTCATCGCTGTCATCCAGAGGCGCCATCACCTGCAACAGACCTCTAGCTACAAGTCCACCGGAAGGAAGCATGGCTGCAAGTCCATTCCAAAGTGGAGGCTAACCAAAAAGACGCAAATTGATGATATGAAGAGGGGAATTATGATCCTGCAGCACCTCTCGGATCAACCCAACATCATTGAGTTCAAGGGTGCTTACAAGGATTGGCAGAATGTGCATTTGGTGATGGAGTGGTGTTTAGGTTGCGAGCTTTTCGGTCGCTGCAAAGGGTAG 558 0.5179 MAFPESPETQTKPENVSNSNCKSHRAERHTPSLLRPIENHDQAKFQIASAATNPKSPKPLRYRAFISQAPLQRRHPPSTPPSMRKILASRDILSRVIAVIQRRHHLQQTSSYKSTGRKHGCKSIPKWRLTKKTQIDDMKRGIMILQHLSDQPNIIEFKGAYKDWQNVHLVMEWCLGCELFGRCKG 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00596 185 Gene3D Phosphorylase Kinase; domain 1 107 183 - -
Vian6g00596 185 MobiDBLite consensus disorder prediction 1 41 - -
Vian6g00596 185 MobiDBLite consensus disorder prediction 21 35 - -
Vian6g00596 185 SUPERFAMILY Protein kinase-like (PK-like) 113 181 IPR011009 -
Vian6g00596 185 PANTHER SERINE/THREONINE-PROTEIN KINASE 111 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00596 Vian-Chr6 22201974 22204377 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00596 114 182 EF-hand Containing Proteins AT3G20410 62.319 2.55e-23 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Vian6g00596 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00596 K13412 - han:110894677 104.375