Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00572 ATGGAGAAAGTGAAAGAGCAATTACTCAATTGGTCTAAGGAGGCAGGTCTCCCGCTGCCAGATGTTTTATCCGTGAACTGCACAACTCTTGCTAGCACATCGGATATTTTCACAAAGATGGTTGGGTTAAACCAAACACAGGGTAAAAAGGTTTCAGCCTCGCCCTTACAGCAACTTCATAACATGTATTCTCAGAAATCATCTATCAACAACATGACATTGATAGTAGCTGACGAATTAGATTATTTGATAACCAAAGACAGAGCCGTTCTTCATGATCTTTTTATGCTCACTACCTTTCCATTTTCTAGATGTATATTGATAGGTGTAGCGAATGCAATTGATTTAGCTGATCGATTTCTTCCGAGGCTTACATCATTAAATTGCAAGCCTGTGGTTGTAAATTTCCAGGCTTACTCGAAAGATCAGATCCTCAAGATTCTTGAAGAAAGATTAAAGGAACTTCCTTACATTGTCTTTCAACAGCCGGCCCTGGAACTATGTGCTAGGAAAGTTGCCGCATCTTCTGGAGACATGCGGAATGCCCTTTCTATATGCTGGAGTGCAATCGAGATGCTTGAAGCAGAAATTAGAGAATCTGCGTGCAATTTGAACACTTCATTGGAAGAGATATCATTCTCCAAACAAAATCTTCCCACAGCTCCTGATTGTATGAAAAAACGTGAATTTGATATTGTGAGAACTGATCATATGGCTCGAGCCTTGTCCAAGACTTATAGATCACCTGTGGTGGATACGATACAATCTCTGCCACATCATCAGCAGATTATACTCTGCTCTTCTATGAATCACTTTCGAGAAGCCAAGAAAGATACATTCCTAGGAGAGTTGTATCAATCGTATGTGGGGATATGCAGATCATCTTTAATTCCTCCAGCAGGAATCTTAGAATTTTCGAACATGTGCAGAGTGCTAAGTGACCAGGGTCTTATTAAACTAGGACAATCTCGAGAGGATAAATTAAGAAGAGTGTCGCCTAAAGTAAATGAGGGTGATATTACTTTTGCATTGCAGGGGATACGGTTTTTTCACAACTGTCTTAAATGA 1068 0.3998 MEKVKEQLLNWSKEAGLPLPDVLSVNCTTLASTSDIFTKMVGLNQTQGKKVSASPLQQLHNMYSQKSSINNMTLIVADELDYLITKDRAVLHDLFMLTTFPFSRCILIGVANAIDLADRFLPRLTSLNCKPVVVNFQAYSKDQILKILEERLKELPYIVFQQPALELCARKVAASSGDMRNALSICWSAIEMLEAEIRESACNLNTSLEEISFSKQNLPTAPDCMKKREFDIVRTDHMARALSKTYRSPVVDTIQSLPHHQQIILCSSMNHFREAKKDTFLGELYQSYVGICRSSLIPPAGILEFSNMCRVLSDQGLIKLGQSREDKLRRVSPKVNEGDITFALQGIRFFHNCLK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00572 355 CDD Cdc6_C 258 340 IPR015163 -
Vian6g00572 355 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 199 IPR027417 -
Vian6g00572 355 Gene3D - 130 254 - -
Vian6g00572 355 SUPERFAMILY "Winged helix" DNA-binding domain 250 353 IPR036390 -
Vian6g00572 355 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 2 353 - -
Vian6g00572 355 Coils Coil 190 210 - -
Vian6g00572 355 Gene3D - 1 129 IPR027417 -
Vian6g00572 355 FunFam Cell division control protein 257 347 - -
Vian6g00572 355 Pfam CDC6, C terminal winged helix domain 265 343 IPR015163 -
Vian6g00572 355 Gene3D - 255 338 IPR036388 -
Vian6g00572 355 SMART Cdc6_C_2 265 344 IPR015163 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00572 1 354 Core DNA Replication Machinery Family AT2G29680 59.218 9.98e-148 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00572 K02213 - gmx:100787371 620.157