Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00525 ATGCTTGCCCTTCCACCACCACCTCCTCCACCACCCCTAGCCACAAGAAAACAAACCAAGCAAGTGTCTCCTGATCAAATTGTCATATCAAAACACCCCATCAAACAACATTCTCAGGAACCCGAAGCACCAAATTATGTTGCACCAAAGTCAATTAGGCCACCACCACCACCACTAAGGCAGCCTCCATTTCAAAGGACCAATCCCATCATATGGTTTGCTGCAGTGTTGTGTCTCATATTCAGCCTTGTGCTTATCTTCTTTGGAGTTGCAACTTTGATAATCTTCCTAGGCATCAGACCAAGGAACCCCACTTTTGACATCCCCAATGCAAACCTTAATTCAGTGTACTTTGACTCACCAGAATACTTCAATGGTGACTTCACCCTCCTTGCAAACATCACCAACCCCAACAGGAAGATTGATGTGAGGTTTGAGTCTTTGGATATTGAACTTTTCTTCTCAGACAGGATCATATCAACACAGTCCATTCAGCCCTTTACTCAGAGGAGAAGAGAGAGCAGGTTGGAATCACTGCACTTCATATCCAGCTTGGTGTTTTTGCCTAAGGATCTTGGTGTGAACCTTAAAGGACAGGTGCAAGGTAACATGGTCAAGTACAATGTGAGAGGAACCTTTAAAGTGAGAGTAACTATCGGGTTATTCCACTTGTCTTACTGGTTGCATAGCAGATGCCAGATAGAGATGACTGCTCCACCAACTGGTGTCTTGGTGGCTAGGAAGTGCATCACCAAGAAATGA 762 0.4475 MLALPPPPPPPPLATRKQTKQVSPDQIVISKHPIKQHSQEPEAPNYVAPKSIRPPPPPLRQPPFQRTNPIIWFAAVLCLIFSLVLIFFGVATLIIFLGIRPRNPTFDIPNANLNSVYFDSPEYFNGDFTLLANITNPNRKIDVRFESLDIELFFSDRIISTQSIQPFTQRRRESRLESLHFISSLVFLPKDLGVNLKGQVQGNMVKYNVRGTFKVRVTIGLFHLSYWLHSRCQIEMTAPPTGVLVARKCITKK 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00525 253 MobiDBLite consensus disorder prediction 1 15 - -
Vian6g00525 253 Pfam Late embryogenesis abundant protein 133 232 IPR004864 -
Vian6g00525 253 SUPERFAMILY LEA14-like 104 225 - -
Vian6g00525 253 MobiDBLite consensus disorder prediction 1 60 - -
Vian6g00525 253 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00525 Vian-Chr6 20523740 20524501 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00525 - - gmx:100803431 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian6g00525 6 20523740 20524501 Vian7g01081 7 19040498 19041193 PCT