Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00516 ATGGCGTTCTCCACAGTTAGCGTCACCGCTGCTCCCTATGGTTCATGGAAATCCCCCATCACCGGCGACGTTGTCTCCGGCGCCACCAAGGATCTGGGCGGCACCGCTGTGGATGGCCGAGGCCGCCTCATTTGGCTGGAATTCCGTCCATTAGAATCAGGGCGTGGAGTTCTTGTTCTTGAGCCAGAAAAAACAGGAGGTGAGGCTGTGGATATTACTCCTAAGGAGTTTGGAGTGAGAACATTGGCTCAGGAATATGGAGGCGCTGCTTTTACTGTTTCTGGGGATGTTGTCTTCTTTGCAAATTACAATGATCAGAGGTTGTACAAGCAGTCCATCAGTTCTCTGGATGAGCCTCCTTTACCACTCACTCCGGATTATGGTGGACCCGTAGTCAGCTATGCTGATGGAATATTGGATGCACGATTTAACCGTTTTCTTTGTGTTAGGGAAGATCGTCGTGAAAGCAGTCTAAATCCACCTACAACTATTGTATCCATAGCACTTGGCAGCAAAGATGTTCAGGAACCAGTTGTTCTAGTTGGTGGGAGTGACTTCTATGCCTACCCACGTCTAGATTCTAAAAGTGAGAGAATAGCATGGATTCAGTGGAATCACCCCAACATGCCATGGGACAAAACAGAACTTTGGGTTGGCTATATTTCTGAAAATGGTGAGATCTACAAACGTGTTTGTGTTGCTGGGCATGATCCTTCACTTGTGGAGTCTCCAACTGAACCCAAGTGGTCCTCTGAGGTTACAGGTGATTCTAAGCAGCATGGAAAGTCATATCTGGGTATTGTTGATGTAGAGGGCTCAAAGCTAACTGTGATTGATTTCCCTTGCACAGACATAAATAACATAACATCTGGTAATGATTTCTTGTACGTGGAGGGAGCATCTGAGGTTCTTCCATCATCAGTGGCCAAGGACATTCAAACTTCAATCTTCTATTTCAAGTCTCTATGGTTCATGAGGTGTTGTAGTATGGGTGGTTACAGAAGTGTTGATAGGGCATACAGAGAACGACTTTTGAGACAGTGGGGAATAGTTGATGTTAATGACTGTTGTAGTTGTGCTACATATTTGGTGGAGAGTGGAAAGGTGGATAAGGAGAGGCTGTGTATAATGGGTGGCTCTGCTGGTGGGTATACCACCTTGGCAGTTCTTGCTTTCAGAAATACTTTTCAGGCTGGTGCTTCTTTGTATGGAATAGCTGACTTCAATTTGTTGAGAGCAGAAACTCATAAGTTTGAATCCCATTATGTTGAAAATCTAGTTGGAGGTGATAAGGAGATGTATGAAAGATCTCCTATTAATCATGTTGATGATTTTTCTTGTCCCATTATAATATTTCAAGGATTGGAGGACAAGGTTGTGCCACCGGATCAAGCTGAAAAAATATACCAGGCAGTGAAGGAGAAAGGTGTGCCAGTTGCTCTTGTTGAGTATGAAGGGGAACAACACGGTTTCCGAAAGGCTGAGAACATTAAGAATACAATTGAACAAGAAATGGTATTCTTTGCACGATTGATTGGGCACTTTGATGTTGCTGATGATATTACTCCTATCAAAATTGACAACTTTGATTGCTAA 1596 0.4392 MAFSTVSVTAAPYGSWKSPITGDVVSGATKDLGGTAVDGRGRLIWLEFRPLESGRGVLVLEPEKTGGEAVDITPKEFGVRTLAQEYGGAAFTVSGDVVFFANYNDQRLYKQSISSLDEPPLPLTPDYGGPVVSYADGILDARFNRFLCVREDRRESSLNPPTTIVSIALGSKDVQEPVVLVGGSDFYAYPRLDSKSERIAWIQWNHPNMPWDKTELWVGYISENGEIYKRVCVAGHDPSLVESPTEPKWSSEVTGDSKQHGKSYLGIVDVEGSKLTVIDFPCTDINNITSGNDFLYVEGASEVLPSSVAKDIQTSIFYFKSLWFMRCCSMGGYRSVDRAYRERLLRQWGIVDVNDCCSCATYLVESGKVDKERLCIMGGSAGGYTTLAVLAFRNTFQAGASLYGIADFNLLRAETHKFESHYVENLVGGDKEMYERSPINHVDDFSCPIIIFQGLEDKVVPPDQAEKIYQAVKEKGVPVALVEYEGEQHGFRKAENIKNTIEQEMVFFARLIGHFDVADDITPIKIDNFDC 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00516 531 Pfam Prolyl oligopeptidase family 334 513 IPR001375 GO:0006508|GO:0008236
Vian6g00516 531 SUPERFAMILY alpha/beta-Hydrolases 332 511 IPR029058 -
Vian6g00516 531 Gene3D alpha/beta hydrolase 327 518 IPR029058 -
Vian6g00516 531 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 330 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00516 Vian-Chr6 20335168 20361798 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00516 312 530 Carbohydrate Esterase AT5G36210 70.000 6.18e-103 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00516 - - zof:121998448 581.252