Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00512 ATGAAGCATTTGCCTAAGACTCCCCCACCACTGTCAAGGATTGGGAATTTACCAGCAACACGACAATTAAACTCTCAAGTCAGTCAATCACATGTTATAGCAACTTCTGTTCCAATAAATTCTGTCCAATTCGTGTCTGGTACTGGCCAAGCTGTGTTGCCTTCAACTACGGCCACTGTTATTGGCACTAGTTCATTGTCGTCTGACACTTCTATCTTCAGTGACCTGCCTGCTGATTCTAAACGTAATCCTCGGCGGGGACATGAACTTGTACTGCATGTTTTGTACCATCTGCACTCCCTGATGATATTCGATTCAGTTGAAAATGCTTCATCTTCTGCTGTTTTATATGAAAAATTTCTCTTGGGAGTGGCCAAAACTTTATTGGACTCTTTTCCAGCTTCAGACAAGTCTTTTAGTAGACTTCTTGGTGAAGTTCCACTTTTGCCTGAGTCGTCCTTGAAGATTTTGAATGATGTCTGCTATTTTGATATTATTGGTCATGATGGAAAAGTTATCTGTGACATTGAACGTGTGACTCAAGGCCTTGGTGCTATCTGGAGTTTAATTTTGGGGCGTCCACAAAATCGCCAAGCCTGCTTGGGAATAGCATGGAAGATCTTTGCTGTTTATGTTTACCCTCTTATGAAAGTTCTCACATTAAACAAGATGGCTAGGAAGTGGTGGAGAATGTTTCTTAAATCAATGAAGCTGAAGTTTGAAGACTGTCTTCCTGCCTGGTTATCAATGTTGGCTACTAGTGCTGTTACTTCTTTGCCCGTGTTACCACCAGTGAGAAGAGGTGGCCACCACAATGAGCAGAATGTTGGTACCTCATTGAGTTTACCAAGACTATCATGGACAACTAATAATTCAAAATCTCCTAGTTGTGCACAGTTTCCATTTGGTACAAGAGCTCGCTCTCCTCAAACAGCAACTATAATATGTTCTGCAGCTTTGAATGCAAGATGTGGTGCAGAGCAAACCCAAACTGTTACTCGAGAGGCTCCTACAATTACTCACATTCCTGGAAAGGAGAAGTCACCACAGCTTGACGACGGAGGAACTGGATTTCCACCTCGTGATGATGATGATGGTGGTGGTGGAGGCGGCGGAGGTGGAGGCAACTGGTCTGGTGGATTCTTCTTTTTTGGGTTTCTTGCTTTTCTTGGTTTCTTAAAGGATAAGGAAACCGAAGACACATACGGGGATGACCGAAGAAGGTTGCATTGGTCAATTGAGGTTCTGGGCTTGCGTGAGATGATGTAA 1269 0.4326 MKHLPKTPPPLSRIGNLPATRQLNSQVSQSHVIATSVPINSVQFVSGTGQAVLPSTTATVIGTSSLSSDTSIFSDLPADSKRNPRRGHELVLHVLYHLHSLMIFDSVENASSSAVLYEKFLLGVAKTLLDSFPASDKSFSRLLGEVPLLPESSLKILNDVCYFDIIGHDGKVICDIERVTQGLGAIWSLILGRPQNRQACLGIAWKIFAVYVYPLMKVLTLNKMARKWWRMFLKSMKLKFEDCLPAWLSMLATSAVTSLPVLPPVRRGGHHNEQNVGTSLSLPRLSWTTNNSKSPSCAQFPFGTRARSPQTATIICSAALNARCGAEQTQTVTREAPTITHIPGKEKSPQLDDGGTGFPPRDDDDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKETEDTYGDDRRRLHWSIEVLGLREMM 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00512 422 PANTHER PROTEIN FERTILITY RESTORER RF2, MITOCHONDRIAL 250 408 IPR040299 -
Vian6g00512 422 MobiDBLite consensus disorder prediction 328 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00512 Vian-Chr6 20280937 20289405 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00512 302 408 C2H2 Transcription Factor Family AT1G56200 68.807 1.73e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00512 K06100 - vum:124845177 220.32