Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00487 ATGTGGCTGCTACTTCAGATGTACCCAACATTAAGATACCAGATATCAGGAGATGGTGAAAGGCATGATCAAACTCCTCCTCCTGTTGCTGCTTCACATGCCTCATCATCCAATGAGGTGGATGAAATTACGAACTCTGTACATGATAAACGAAGCCATGCTGAGTATAGTAAGGACTCAAAAACTGTAACATTGGGTGAGTGGATATCAAGTTGTTCACAATATCCTGATATGCGAGCAAATGTTTCTTGTTTCTTTGGGTATCCAGATATTGTGATGCTTCATTCGATGCATCCACTTGTTTTCCTTCCAGATAGAACATCCAGTAGAGTAGTCTTGCCAGCACCACTTACACCCATCAGAGCTGTTAGCACCCCTGGCCTAAAAGCACCATTAATACCTTTCAGAAGTAAATTAACTGATAAAAGTGATGTATATGCTTTTGGAGTTGTTCTACTGAAGCTTCTCGTTGGAAAGAAGCTTCTCGTTGTTCTACTGTAG 501 0.4112 MWLLLQMYPTLRYQISGDGERHDQTPPPVAASHASSSNEVDEITNSVHDKRSHAEYSKDSKTVTLGEWISSCSQYPDMRANVSCFFGYPDIVMLHSMHPLVFLPDRTSSRVVLPAPLTPIRAVSTPGLKAPLIPFRSKLTDKSDVYAFGVVLLKLLVGKKLLVVLL 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00487 166 MobiDBLite consensus disorder prediction 16 56 - -
Vian6g00487 166 SUPERFAMILY Protein kinase-like (PK-like) 109 160 IPR011009 -
Vian6g00487 166 Gene3D Transferase(Phosphotransferase) domain 1 92 163 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00487 121 159 Trihelix Transcription Factor Family AT4G32710 56.410 1.33e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00487 - K08030 dosa:Os09t0332600-01 71.2478