Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00470 ATGATCAAAACTCTAAGGTCTAACTTCATTCAGACTTATTCCAAGAAACAAAAGCCAAAGCTCCCTCCTGGACCCAAACCATGGCCTATAGTAGGCAACCTTCCTGAAATGCTTGCAAGCAAACCTGCTTATAAGTGGATACATAATCTCATGAAACAAATGAACACTGATATTGCATGTATCCGCTTAGGAAATGCCTATGTCATCCCAGTCACGTCTTCCACCATTGCTACTGAGTTCTTGAGAAAACAAGATGCTACTTTTGCATCAAGATCACTCAGCATGTCCAGTGATCTCATTTCTAATGGATATTCAACAACAATTTTTGTGCCCTTCGGTGACCAGTGGAAGAAAATGAGGAAAATCGTAACCAACGATTTGCTTTCTCCACATAAGCACCGATGGCTTCACGACAAAAGAACTGAAGAGGCCGACAACCTTATGTTTTACGTCTTCAACAAGTGCAAAATGGTGAACGATGGTACTTATGGCCTTGTGAATGTTAGGAATGCTGCAAGGCATTATTGTGGCAACTTCATCAGAAAAATTACTTTCAATGTAAGGTATTTTGGGGATGGTAGAGAGGACGGAGGAGCCGGTTTTGAAGAAGTAGAACATGTTGATTCCATCTTCGATTTGCTCAACTACATTTATTCCTTTTCTGTTTCTGATTATATGCCATACTTGAGGAAACTTCACTTGGATGACCAAGAGAAGAAAGTGAGGGAAGCTTTGAGGATCATCAAGAAGTATCATGATCCCATCGTTCAACAGAGAATCAAACAATGGAATGATGGATTAAAGGTTGATGAAGAGGACTGGCTTGATGTTCTCATCTCTCTGAAAGATTCCAACAATAACCCATCGTTAACATTCCAAGAGATCAGTGCACAAATCATAGAATTGATGCTTGCAACAGTGGACAATCCATCCAATGCATTTGAATGGGCACTTGCTGAGATGATTAACCAACCTGAGATACTGCGTCGAGCTTTCAAACCTGAACGCCACCTGAAGAGTGATGCAGATGATGTGGTTTTGACTGAACCAAATCTGAAGTTCATATCATTTAGCACAGGAAGACGAGGTTGTCCCGCAGTGATGCTAGGAACGACAATGACAGTGATGCTATTTGCTAGATTGATCCATGGCTTCACTTGGACTGCACCACCCGATGTTTCAACAATCAATCTTTCTGAGTCAGACCATGATATCCTTCTTGCACAACCACTCGTAGCCATTGCTCAGCCAAGGTTACCACCAAAGCTATACCAACTCTAA 1281 0.4153 MIKTLRSNFIQTYSKKQKPKLPPGPKPWPIVGNLPEMLASKPAYKWIHNLMKQMNTDIACIRLGNAYVIPVTSSTIATEFLRKQDATFASRSLSMSSDLISNGYSTTIFVPFGDQWKKMRKIVTNDLLSPHKHRWLHDKRTEEADNLMFYVFNKCKMVNDGTYGLVNVRNAARHYCGNFIRKITFNVRYFGDGREDGGAGFEEVEHVDSIFDLLNYIYSFSVSDYMPYLRKLHLDDQEKKVREALRIIKKYHDPIVQQRIKQWNDGLKVDEEDWLDVLISLKDSNNNPSLTFQEISAQIIELMLATVDNPSNAFEWALAEMINQPEILRRAFKPERHLKSDADDVVLTEPNLKFISFSTGRRGCPAVMLGTTMTVMLFARLIHGFTWTAPPDVSTINLSESDHDILLAQPLVAIAQPRLPPKLYQL 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00470 426 Gene3D Cytochrome P450 331 418 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00470 426 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 357 366 IPR017972 GO:0005506|GO:0016705
Vian6g00470 426 Pfam Cytochrome P450 22 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00470 426 Pfam Cytochrome P450 331 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00470 426 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 331 425 - -
Vian6g00470 426 Gene3D Cytochrome P450 13 330 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00470 426 SUPERFAMILY Cytochrome P450 18 395 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00470 Vian-Chr6 19366727 19368531 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00470 331 424 Cytochrome P450 AT4G39950 54.255 1.98e-26 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00470 - K12153 vra:106774787 594.734