Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00462 ATGGAAATTGGTGTCGAAAACATTCCCTCACTTGCAATCTTACCTTTGTTCATCTTCTTGTTCGCAGTGTTTGCCATATTCTGGAGAACAAAAACTAAGTCTTCAAACTCCAAGTTACCACCAGGACCACCAAAACTAGCCCTTATAGGAAACTTGCACCAGCTTGGAGCAATGCCTCATCATGGCCTGGCAAAACTTTCACACCACTATGGCCCTCTCATGCACATAAAACTTGGTGCACTTTCCACCATAGTGGTGTCTTCCCCTGAAATGGCCAAGGAAGTGATGAAGACACATGACATCATTTTTTCAAATAGGCCTTATCTTCTTGCAGCAGATGTTATATCCTATGGCTCCAAGGGAATCAGTTTTTCCCCTTATGGCAGTTACTGGAGGCAGATGAGAAAGATCTGCACCTTTGAGCTACTAACTCCAAAGCGTGTTGAATCATTCAAAGCAATTAGAGAAGAGGAAGCATCAAAGCTTGTTAAAGAGGTAGGTTTGAGAGAAGGGTCATCTACGAATGTCAGTAAGATGATCAATTCCTTCTCCTATGGATTGACATCAACTGTAGCTTTTGGAAGTAAATCCAAAGATCAAGAAGCTTTCATAGCTGTTATGAAAGATGTCTTAAAAGTTGTTGCTGGTTTCTCCCTGGCTGACTTGTATCCTATTAAAGTGCTTCCAGTTTTGACTGGATTAAGGTCTAGAGTTGAGAAGTTACATCAAGAAGTGGATAGGATCCTGGAGAAAATTGTGAGAGATCACAGGGTCACTGGTTCTGAAACAAAGGAAACCAATGAAAAAGAAGGAGAGGATCTTGTTGATGTCCTGCTAAAGCTTCAGAAGCAGAACAACCTTGAGCATCCTCTATCCGACAACGTTATCAAAGCAACCATTTTGGATATCTTCAGTGCTGGAAGTGGTACTTCAGCTAAAACCACAGATTGGGCCATGTCAGAACTTGTGAAAAACCCAAGGGTTATGGAGAAAGCACAATCTGAGATAAGAAGGGTGTTTGGTGAAAAGGGGCATGTAGATGAAGCCAACCTCCATGAACTGAAGTACTTGAAGTCAATAATCAAAGAAACACTGCGACTACACCCTCCTGTTCCATTATTACTACCAAGAGAGTGCAGTGAGAGATGTGAAATCAATGGGTATGAAATACCAGCTAAAAGCAAGGTTATTGTTAATGCTTGGGCTATTGGAAGGGATCCAAACTATTGGAATGATGGTGAGAATTTTTGTCCAGAAAGGTTCCTCGATTGTTCAGTTGATTACAAAGGTGCAGATTTTCAGTTTATTCCATTTGGTGCTGGAAAGAGGATGTGCCCTGGAAGCACTTTTGGCATTGCTAATGTTGAACTGTTGCTAGCAAATTTACTTTTTCATTTTGATTGGAAGATGCCTAATGGGAATACGCCTGAAGAGCTTGACATGACTGAATCATTTGGCTTGTCTGTTAGAAGGAAACATGATTTGTGTTTGATTCCTTACATTTGCCACTCATTTGCTAATTACAACCATTGA 1533 0.409 MEIGVENIPSLAILPLFIFLFAVFAIFWRTKTKSSNSKLPPGPPKLALIGNLHQLGAMPHHGLAKLSHHYGPLMHIKLGALSTIVVSSPEMAKEVMKTHDIIFSNRPYLLAADVISYGSKGISFSPYGSYWRQMRKICTFELLTPKRVESFKAIREEEASKLVKEVGLREGSSTNVSKMINSFSYGLTSTVAFGSKSKDQEAFIAVMKDVLKVVAGFSLADLYPIKVLPVLTGLRSRVEKLHQEVDRILEKIVRDHRVTGSETKETNEKEGEDLVDVLLKLQKQNNLEHPLSDNVIKATILDIFSAGSGTSAKTTDWAMSELVKNPRVMEKAQSEIRRVFGEKGHVDEANLHELKYLKSIIKETLRLHPPVPLLLPRECSERCEINGYEIPAKSKVIVNAWAIGRDPNYWNDGENFCPERFLDCSVDYKGADFQFIPFGAGKRMCPGSTFGIANVELLLANLLFHFDWKMPNGNTPEELDMTESFGLSVRRKHDLCLIPYICHSFANYNH 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00462 510 Pfam Cytochrome P450 40 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00462 510 CDD CYP71-like 70 495 - -
Vian6g00462 510 FunFam Cytochrome P450 71D8 32 499 - -
Vian6g00462 510 PANTHER CYTOCHROME P450 71B11-RELATED 23 500 - -
Vian6g00462 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Vian6g00462 510 Gene3D Cytochrome P450 25 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00462 510 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00462 510 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00462 510 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00462 510 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00462 510 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00462 510 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00462 510 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00462 510 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00462 510 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00462 510 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00462 510 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00462 510 SUPERFAMILY Cytochrome P450 40 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian6g00462 510 Coils Coil 231 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00462 Vian-Chr6 19179310 19181368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00462 19 503 Cytochrome P450 AT5G25180 42.105 2.28e-137 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian6g00462 - - gmx:100818000 879.782